RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 CDC14AQ9UNH5 594 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 FBP2O00757 339 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 MRASO14807 208 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 NRP2O60462 931 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 EFEMP2O95967 443 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 JCHAINP01591 159 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 NELFEP18615 380 aaKnown RBP8.93□□□□□ -0.98
GPNMB-202ENST00000381990 IL10P22301 178 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 ATP5F1P24539 256 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-202ENST00000381990 CD68P34810 354 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-202ENST00000381990 CCR10P46092 362 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 OXCT1P55809 520 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 RAB10P61026 200 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 PRAMEP78395 509 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 EFEMP1Q12805 493 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 GRSF1Q12849 480 aaKnown RBP eCLIP8.93□□□□□ -0.98
GPNMB-202ENST00000381990 TAF10Q12962 218 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 DUSP4Q13115 394 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 TRIP4Q15650 581 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-202ENST00000381990 SMAD1Q15797 465 aaKnown RBP8.93□□□□□ -0.98
GPNMB-202ENST00000381990 NIPAL1Q6NVV3 410 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 CNKSR3Q6P9H4 555 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 PRSS55Q6UWB4 352 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-202ENST00000381990 ABRAXAS1Q6UWZ7 409 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.93□□□□□ -0.98
GPNMB-202ENST00000381990 ATPAF2Q8N5M1 289 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 RTL3Q8N8U3 475 aaKnown RBP8.93□□□□□ -0.98
GPNMB-202ENST00000381990 PDPRQ8NCN5 879 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 FBXO22Q8NEZ5 403 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 TDRD1Q9BXT4 1180 aaKnown RBP8.93□□□□□ -0.98
GPNMB-202ENST00000381990 AGPAT4Q9NRZ5 378 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 SMOXQ9NWM0 555 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.93□□□□□ -0.98
GPNMB-202ENST00000381990 FNIP2Q9P278 1114 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 TBX21Q9UL17 535 aa8.93□□□□□ -0.98
GPNMB-202ENST00000381990 A0A087X1B8 175 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 WASH4PA8MWX3 477 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 DFFAO00273 331 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 ATE1O95260 518 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 STMN1P16949 149 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 CKMT2P17540 419 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 NFKB1P19838 968 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 PSMA4P25789 261 aaKnown RBP8.92□□□□□ -0.98
GPNMB-202ENST00000381990 GLRBP48167 497 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 BCAP31P51572 246 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 ATP6V0D1P61421 351 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 KCNC4Q03721 635 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 CDH17Q12864 832 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 BNIP2Q12982 314 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 MTA1Q13330 715 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 AGKQ53H12 422 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 PIK3R6Q5UE93 754 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 AFMIDQ63HM1 303 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 SLC8B1Q6J4K2 584 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 C16orf87Q6PH81 154 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 C14orf80Q86SX3 495 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 LINC00523Q86TU6 105 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 LRRC49Q8IUZ0 686 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 CBR4Q8N4T8 237 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 CCNYL1Q8N7R7 359 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 ATP6V0D2Q8N8Y2 350 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 KCTD4Q8WVF5 259 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 TRUB1Q8WWH5 349 aaKnown RBP8.92□□□□□ -0.98
GPNMB-202ENST00000381990 CEP295NLQ96MC4 621 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 HOPXQ9BPY8 73 aaPredicted RBP8.92□□□□□ -0.98
GPNMB-202ENST00000381990 C1orf50Q9BV19 199 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 KIFC1Q9BW19 673 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 MARCH2Q9P0N8 246 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 MTRRQ9UBK8 725 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 MTF2Q9Y483 593 aaPredicted RBP8.92□□□□□ -0.98
GPNMB-202ENST00000381990 FADS3Q9Y5Q0 445 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 BACE2Q9Y5Z0 518 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 PLOD2O00469 737 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 PSMD3O43242 534 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 GPC4O75487 556 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 TIPRLO75663 272 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 FASP25445 335 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 GRIA3P42263 894 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 TMBIM6P55061 237 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 CTBSQ01459 385 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 RALGDSQ12967 914 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 PRPSAP1Q14558 356 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 C10orf120Q5SQS8 335 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 TMTC4Q5T4D3 741 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 C1QTNF12Q5T7M4 302 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 NAPEPLDQ6IQ20 393 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 CYP2R1Q6VVX0 501 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 PTAR1Q7Z6K3 402 aaPredicted RBP8.92□□□□□ -0.98
GPNMB-202ENST00000381990 KLHDC8BQ8IXV7 354 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 ACVR1CQ8NER5 493 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 CANT1Q8WVQ1 401 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 SLC35B4Q969S0 331 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 CENPNQ96H22 339 aaPredicted RBP8.92□□□□□ -0.98
GPNMB-202ENST00000381990 FEM1CQ96JP0 617 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 BTN2A3PQ96KV6 586 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 GPR78Q96P69 363 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 MLPHQ9BV36 600 aaPredicted RBP8.92□□□□□ -0.98
GPNMB-202ENST00000381990 TTLL2Q9BWV7 592 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 SLC39A8Q9C0K1 460 aa8.92□□□□□ -0.98
GPNMB-202ENST00000381990 CWH43Q9H720 699 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms