RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 SF3A2Q15428 464 aaKnown RBP6.53□□□□□ -1.36
NEDD9-202ENST00000379446 KBTBD12Q3ZCT8 623 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 C6orf10Q5SRN2 563 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 ZBTB46Q86UZ6 589 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 ST13P4Q8IZP2 240 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-202ENST00000379446 FITM2Q8N6M3 262 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 TEX9Q8N6V9 391 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 FAM71DQ8N9W8 422 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 CLEC1AQ8NC01 280 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 ZCCHC10Q8TBK6 192 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 ART4Q93070 314 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 BBS4Q96RK4 519 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 TBCBQ99426 244 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 FOXP3Q9BZS1 431 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 PREBQ9HCU5 417 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 AHSPQ9NZD4 102 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 WHRNQ9P202 907 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 TRPC4Q9UBN4 977 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 CACNA1AO00555 2505 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 KCNU1A8MYU2 1149 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 PPEF2O14830 753 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 WNT9AO14904 365 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 KRT36O76013 467 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 CALB2P22676 271 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 EDNRBP24530 442 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 RPL10P27635 214 aaKnown RBP6.53□□□□□ -1.36
NEDD9-202ENST00000379446 SLC1A1P43005 524 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 TAS2R40P59535 323 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 E2F1Q01094 437 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 CAV1Q03135 178 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 ZNF268Q14587 947 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-202ENST00000379446 ZDHHC20Q5W0Z9 365 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 NCEH1Q6PIU2 408 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 CRELD2Q6UXH1 353 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-202ENST00000379446 GDPD4Q6W3E5 623 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 SYT12Q8IV01 421 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 FBXO15Q8NCQ5 510 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-202ENST00000379446 PSMG2Q969U7 264 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 TSACCQ96A04 125 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-202ENST00000379446 C5orf34Q96MH7 638 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 WDR92Q96MX6 357 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 PHF12Q96QT6 1004 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 FAM83CQ9BQN1 747 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 PHACTR1Q9C0D0 580 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 RPS6KB2Q9UBS0 482 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 PSME2Q9UL46 239 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 NAV1Q8NEY1 1877 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 SPAARA0A1B0GVQ0 90 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 A8MUA0 341 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 CLDN4O14493 209 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 PROSCO94903 275 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 LSM8O95777 96 aaKnown RBP6.53□□□□□ -1.36
NEDD9-202ENST00000379446 ARG2P78540 354 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 PDK2Q15119 407 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 CRY1Q16526 586 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 CCNG2Q16589 344 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 RGS9BPQ6ZS82 235 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 FAM183BPQ6ZVS7 135 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 ZDHHC14Q8IZN3 488 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 EID3Q8N140 333 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 SPOCK2Q92563 424 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 RELTQ969Z4 430 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 BTBD9Q96Q07 612 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 EFHD1Q9BUP0 239 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 MYLK2Q9H1R3 596 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 RNPEPL1Q9HAU8 725 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 SLCO1B3Q9NPD5 702 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 ARL15Q9NXU5 204 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 MARCOQ9UEW3 520 aaPredicted RBP6.53□□□□□ -1.36
NEDD9-202ENST00000379446 NOCTQ9UK39 431 aaKnown RBP6.53□□□□□ -1.36
NEDD9-202ENST00000379446 POLR1DQ9Y2S0 133 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 N6AMT1Q9Y5N5 214 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 SLX4Q8IY92 1834 aa6.53□□□□□ -1.36
NEDD9-202ENST00000379446 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.52□□□□□ -1.36
NEDD9-202ENST00000379446 MICAL3Q7RTP6 2002 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 KAT6AQ92794 2004 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 QSOX1O00391 747 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 IRAK2O43187 625 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 SNAP91O60641 907 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 KLHL41O60662 606 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 HSPA4LO95757 839 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 CYP1A2P05177 515 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 ITPKBP27987 946 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 USP46P62068 366 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 ZXDAP98168 799 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 HYAL2Q12891 473 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 ELAVL3Q14576 367 aaKnown RBP6.52□□□□□ -1.37
NEDD9-202ENST00000379446 NR0B2Q15466 257 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 EML3Q32P44 896 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 STXBP5Q5T5C0 1151 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 C1orf146Q5VVC0 180 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 LVRNQ6Q4G3 990 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 CYP20A1Q6UW02 462 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 MFSD7Q6UXD7 560 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 UTS2BQ765I0 119 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 ERN2Q76MJ5 926 aaKnown RBP6.52□□□□□ -1.37
NEDD9-202ENST00000379446 ZNF605Q86T29 641 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 KRT78Q8N1N4 520 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 ATP6V1C2Q8NEY4 427 aa6.52□□□□□ -1.37
NEDD9-202ENST00000379446 AGR3Q8TD06 166 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms