RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 POLD2P49005 469 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 DSG1Q02413 1049 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 CACNG1Q06432 222 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 RING1Q06587 406 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 SERINC3Q13530 473 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 PM20D1Q6GTS8 502 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 C16orf87Q6PH81 154 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 CYP2R1Q6VVX0 501 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 OOSP2Q86WS3 158 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 HEPHQ9BQS7 1158 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 ARL8BQ9NVJ2 186 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 HCSTQ9UBK5 93 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 MTRRQ9UBK8 725 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 LRCH1Q9Y2L9 728 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 DTNAQ9Y4J8 743 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 RGSL1A5PLK6 1076 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 NPEPPSL1A6NEC2 478 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 CCDC154A6NI56 674 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 VPS4BO75351 444 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 PRKCHP24723 683 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 LBX1P52954 281 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 SH3BGRP55822 239 aaPredicted RBP14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 MAD2L1Q13257 205 aaPredicted RBP14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 PLEKHG4Q58EX7 1191 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 ARHGAP22Q7Z5H3 698 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 GRASPQ7Z6J2 395 aaPredicted RBP14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 SERPINA9Q86WD7 417 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 FAM13CQ8NE31 585 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 C1QTNF7Q9BXJ2 289 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 CCDC134Q9H6E4 229 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 SYNDIG1Q9H7V2 258 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 WDR41Q9HAD4 459 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 ZFP14Q9HCL3 533 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 CD84Q9UIB8 345 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 KCTD3Q9Y597 815 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 LINC00032P0C843 101 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 ACADSP16219 412 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 ARL4DP49703 201 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 THOP1P52888 689 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 SCD5Q86SK9 330 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 CPNE9Q8IYJ1 553 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 ST13P5Q8NFI4 369 aaPredicted RBP14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 JADE3Q92613 823 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 AP2M1Q96CW1 435 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 NRBF2Q96F24 287 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 CAAP1Q9H8G2 361 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 TLR9Q9NR96 1032 aa14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 MAP1BP46821 2468 aaKnown RBP14.14□□□□□ -0.15
SHROOM1-203ENST00000378679 QSOX1O00391 747 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 GPC1P35052 558 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 CHRNB3Q05901 458 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 CDC16Q13042 620 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 TAF1AQ15573 450 aaPredicted RBP14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 PIK3R6Q5UE93 754 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 PAQR9Q6ZVX9 377 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 UMODL1-AS1Q8N2C9 162 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 FAM120BQ96EK7 910 aaKnown RBP14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 RAD9AQ99638 391 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 STN1Q9H668 368 aaKnown RBP14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 TMEM165Q9HC07 324 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 WNT6Q9Y6F9 365 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 PRAMEF11O60813 436 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 TSNQ15631 228 aaKnown RBP14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 TRNP1Q6NT89 227 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 ZNF366Q8N895 744 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 ESAMQ96AP7 390 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 SH3GL1Q99961 368 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 WRAP53Q9BUR4 548 aaKnown RBP14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 WDR6Q9NNW5 1121 aaKnown RBP14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 POLR3BQ9NW08 1133 aaPredicted RBP14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 BACE2Q9Y5Z0 518 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 A0A1W2PQ67 120 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 MGRN1O60291 552 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 NBNO60934 754 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 TGDSO95455 350 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 OTCP00480 354 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 ALPIP09923 528 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 UGT1A6P19224 532 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 UGT1A1P22309 533 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 UGT1A4P22310 534 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 GSTT1P30711 240 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 UGT1A3P35503 534 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 UGT1A5P35504 534 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 IRF9Q00978 393 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 KRT72Q14CN4 511 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 TXNDC11Q6PKC3 985 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 CRTC3Q6UUV7 619 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 ZYG11AQ6WRX3 759 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 SLC7A5P2Q9GIP4 190 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 ANKRD31Q8N7Z5 1873 aa14.13□□□□□ -0.15
SHROOM1-203ENST00000378679 ANKRD66B4E2M5 251 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 E7ESA3 106 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 SNRPB2P08579 225 aaKnown RBP14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 PKDCCQ504Y2 493 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 PPP2R2DQ66LE6 453 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 PIGWQ7Z7B1 504 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 ZC3HC1Q86WB0 502 aaKnown RBP14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 CYGBQ8WWM9 190 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 ATL1Q8WXF7 558 aa14.12□□□□□ -0.15
SHROOM1-203ENST00000378679 VPS50Q96JG6 964 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms