RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 ZNF829Q3KNS6 432 aaPredicted RBP17.12■□□□□ 0.33
TRIM27-201ENST00000377194 AARS2Q5JTZ9 985 aaKnown RBP17.12■□□□□ 0.33
TRIM27-201ENST00000377194 SIRPB2Q5JXA9 342 aa17.12■□□□□ 0.33
TRIM27-201ENST00000377194 CYP2R1Q6VVX0 501 aa17.12■□□□□ 0.33
TRIM27-201ENST00000377194 CCDC80Q76M96 950 aa17.12■□□□□ 0.33
TRIM27-201ENST00000377194 SETD3Q86TU7 594 aaPredicted RBP17.12■□□□□ 0.33
TRIM27-201ENST00000377194 CPSF7Q8N684 471 aaKnown RBP17.12■□□□□ 0.33
TRIM27-201ENST00000377194 TEX26Q8N6G2 289 aa17.12■□□□□ 0.33
TRIM27-201ENST00000377194 PCDH20Q8N6Y1 951 aaKnown RBP17.12■□□□□ 0.33
TRIM27-201ENST00000377194 RPRD1AQ96P16 312 aaPredicted RBP17.12■□□□□ 0.33
TRIM27-201ENST00000377194 SEPT5Q99719 369 aaPredicted RBP17.12■□□□□ 0.33
TRIM27-201ENST00000377194 OSBPL11Q9BXB4 747 aa17.12■□□□□ 0.33
TRIM27-201ENST00000377194 CCSER2Q9H7U1 834 aa17.12■□□□□ 0.33
TRIM27-201ENST00000377194 NOL11Q9H8H0 719 aaKnown RBP17.12■□□□□ 0.33
TRIM27-201ENST00000377194 KIAA1522Q9P206 1035 aaPredicted RBP17.12■□□□□ 0.33
TRIM27-201ENST00000377194 CORINQ9Y5Q5 1042 aa17.12■□□□□ 0.33
TRIM27-201ENST00000377194 DNAJB1P25685 340 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 LEPRP48357 1165 aaKnown RBP17.11■□□□□ 0.33
TRIM27-201ENST00000377194 ACADVLP49748 655 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 PTK2BQ14289 1009 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 PTPRCAPQ14761 206 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 POLD3Q15054 466 aaPredicted RBP17.11■□□□□ 0.33
TRIM27-201ENST00000377194 NADSYN1Q6IA69 706 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 RNF19BQ6ZMZ0 732 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 LYSMD3Q7Z3D4 306 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 ATP6V0D2Q8N8Y2 350 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 FAM110BQ8TC76 370 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 ANKRD49Q8WVL7 239 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 HDAC10Q969S8 669 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 MRPL57Q9BQC6 102 aaKnown RBP17.11■□□□□ 0.33
TRIM27-201ENST00000377194 HIPK3Q9H422 1215 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 ZNF385DQ9H6B1 395 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 RPF2Q9H7B2 306 aaKnown RBP17.11■□□□□ 0.33
TRIM27-201ENST00000377194 TRPC7Q9HCX4 862 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 VPS45Q9NRW7 570 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 MARCH4Q9P2E8 410 aaPredicted RBP17.11■□□□□ 0.33
TRIM27-201ENST00000377194 TMED5Q9Y3A6 229 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 H3BMQ9 156 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 ATXN1LP0C7T5 689 aaKnown RBP17.11■□□□□ 0.33
TRIM27-201ENST00000377194 PRKAA2P54646 552 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 SLC12A2P55011 1212 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 GNA12Q03113 381 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 GPNMBQ14956 572 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 C6orf183Q5T699 404 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 MFSD4BQ5TF39 518 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 NANOGNBQ7Z5D8 188 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 TMEM173Q86WV6 379 aaPredicted RBP17.11■□□□□ 0.33
TRIM27-201ENST00000377194 CILP2Q8IUL8 1156 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 C17orf50Q8WW18 174 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 COG8Q96MW5 612 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 POMKQ9H5K3 350 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 CXorf21Q9HAI6 301 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 ZBTB26Q9HCK0 441 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 CYP4F12Q9HCS2 524 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 TNFRSF12AQ9NP84 129 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 MARCH5Q9NX47 278 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 ACTL7AQ9Y615 435 aa17.11■□□□□ 0.33
TRIM27-201ENST00000377194 MTMR11A4FU01 709 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 TCAF2A6NFQ2 919 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 MROH6A6NGR9 719 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 DRGXA6NNA5 263 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 TRIM38O00635 465 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 HTRA2O43464 458 aaPredicted RBP17.1■□□□□ 0.33
TRIM27-201ENST00000377194 KCNQ1P51787 676 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 RALGDSQ12967 914 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 SPIDRQ14159 915 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 ZBED5Q49AG3 693 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 TMEM214Q6NUQ4 689 aaKnown RBP17.1■□□□□ 0.33
TRIM27-201ENST00000377194 TMEM207Q6UWW9 146 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 KIAA0408Q6ZU52 694 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 CFAP52Q8N1V2 620 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 OR6P1Q8NGX9 317 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 FATE1Q969F0 183 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 TADA1Q96BN2 335 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 TMEM161AQ9NX61 479 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.1■□□□□ 0.33
TRIM27-201ENST00000377194 A0A087X1B8 175 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 LDB2O43679 373 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 RAMP2O60895 175 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 BMP10O95393 424 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 CLIC3O95833 236 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 IGLV3-27P01718 113 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 ARSAP15289 507 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 ZNF12P17014 697 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 OR1E1P30953 314 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 BMXP51813 675 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 PLK1P53350 603 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 SP3Q02447 781 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 DUSP4Q13115 394 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 SERINC3Q13530 473 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 NR1D2Q14995 579 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 RTP2Q5QGT7 225 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 GIPC2Q8TF65 315 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 PPWD1Q96BP3 646 aaKnown RBP17.1■□□□□ 0.33
TRIM27-201ENST00000377194 TLR8Q9NR97 1041 aaKnown RBP17.1■□□□□ 0.33
TRIM27-201ENST00000377194 TMEM98Q9Y2Y6 226 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 COPG1Q9Y678 874 aaKnown RBP17.1■□□□□ 0.33
TRIM27-201ENST00000377194 TET1Q8NFU7 2136 aa17.1■□□□□ 0.33
TRIM27-201ENST00000377194 KCNC1P48547 511 aa17.09■□□□□ 0.33
TRIM27-201ENST00000377194 ITGADQ13349 1161 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms