RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 NAT9Q9BTE0 207 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 KLHL25Q9H0H3 589 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 GBA3Q9H227 469 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 TASP1Q9H6P5 420 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 FAM149AA5PLN7 773 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 TK2O00142 265 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 MATN1P21941 496 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 BDNFP23560 247 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 GSSP48637 474 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 LIMK2P53671 638 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 GRSF1Q12849 480 aaKnown RBP eCLIP15.03■□□□□ -0
CCHCR1-201ENST00000376266 GPR17Q13304 367 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 OXA1LQ15070 435 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 ARHGAP17Q68EM7 881 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 CLEC14AQ86T13 490 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 SCYL1Q96KG9 808 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 NSMCE3Q96MG7 304 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 SNRNP25Q9BV90 132 aaKnown RBP15.03■□□□□ -0
CCHCR1-201ENST00000376266 MUC3BQ9H195 1237 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 CACNA2D2Q9NY47 1150 aa15.03■□□□□ -0
CCHCR1-201ENST00000376266 ABI2Q9NYB9 513 aaPredicted RBP15.03■□□□□ -0
CCHCR1-201ENST00000376266 LRP8Q14114 963 aa15.02■□□□□ -0
CCHCR1-201ENST00000376266 MAPRE1Q15691 268 aaKnown RBP15.02■□□□□ -0
CCHCR1-201ENST00000376266 PHKG1Q16816 387 aa15.02■□□□□ -0
CCHCR1-201ENST00000376266 TBCELQ5QJ74 424 aa15.02■□□□□ -0
CCHCR1-201ENST00000376266 PERM1Q5SV97 790 aa15.02■□□□□ -0
CCHCR1-201ENST00000376266 LDLRAP1Q5SW96 308 aa15.02■□□□□ -0
CCHCR1-201ENST00000376266 INTS11Q5TA45 600 aaKnown RBP15.02■□□□□ -0
CCHCR1-201ENST00000376266 PRPF38BQ5VTL8 546 aaKnown RBP15.02■□□□□ -0
CCHCR1-201ENST00000376266 REP15Q6BDI9 236 aa15.02■□□□□ -0
CCHCR1-201ENST00000376266 SPATA2LQ8IUW3 424 aaPredicted RBP15.02■□□□□ -0
CCHCR1-201ENST00000376266 CADM3Q8N126 398 aa15.02■□□□□ -0
CCHCR1-201ENST00000376266 ISL2Q96A47 359 aa15.02■□□□□ -0
CCHCR1-201ENST00000376266 EFHD2Q96C19 240 aaPredicted RBP15.02■□□□□ -0
CCHCR1-201ENST00000376266 ALPK1Q96QP1 1244 aa15.02■□□□□ -0
CCHCR1-201ENST00000376266 HGH1Q9BTY7 390 aa15.02■□□□□ -0
CCHCR1-201ENST00000376266 ZNF576Q9H609 170 aa15.02■□□□□ -0
CCHCR1-201ENST00000376266 NANOGQ9H9S0 305 aa15.02■□□□□ -0
CCHCR1-201ENST00000376266 TMEM30AQ9NV96 361 aa15.02■□□□□ -0
CCHCR1-201ENST00000376266 TCAF1Q9Y4C2 921 aa15.02■□□□□ -0
CCHCR1-201ENST00000376266 NDUFB5O43674 189 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 BEST1O76090 585 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 KCNH1O95259 989 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 VNN2O95498 520 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 HDCP19113 662 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 YAP1P46937 504 aaKnown RBP15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 TMBIM6P55061 237 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 CLPPQ16740 277 aaPredicted RBP15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 SAMD4BQ5PRF9 694 aaKnown RBP15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 C6orf10Q5SRN2 563 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 ZYG11AQ6WRX3 759 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 FAM35AQ86V20 835 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 TTC9BQ8N6N2 239 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 PDPRQ8NCN5 879 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 OR2T34Q8NGX1 318 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 OR2T3Q8NH03 318 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 PIWIL1Q96J94 861 aaKnown RBP15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 TUBA1CQ9BQE3 449 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 MROQ9BYG7 248 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 IL22Q9GZX6 179 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 CRISPLD1Q9H336 500 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 ARMC1Q9NVT9 282 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 VPS51Q9UID3 782 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 IRAK3Q9Y616 596 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 REV3LO60673 3130 aa15.02□□□□□ -0.01
CCHCR1-201ENST00000376266 TPST1O60507 370 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 MAPRE2Q15555 327 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 NFE2Q16621 373 aaPredicted RBP15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 CCDC14Q49A88 953 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 AGKQ53H12 422 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 GPR65Q8IYL9 337 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 ANKRD52Q8NB46 1076 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 TSNARE1Q96NA8 513 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 QKIQ96PU8 341 aaKnown RBP eCLIP15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 AGAP2Q99490 1192 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 ZNF670Q9BS34 389 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 PKD2L2Q9NZM6 624 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 FNIP2Q9P278 1114 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 CD300AQ9UGN4 299 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 SLC27A5Q9Y2P5 690 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 ST14Q9Y5Y6 855 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 EYSQ5T1H1 3165 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 MTMR11A4FU01 709 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 TMEM233B4DJY2 109 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 SOX1O00570 391 aaPredicted RBP15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 APOA4P06727 396 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 EEF1B2P24534 225 aaKnown RBP15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 EEF1DP29692 281 aaKnown RBP15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 GLRBP48167 497 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 NDUFV1P49821 464 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 MLLT10P55197 1068 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 PKDCCQ504Y2 493 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 SPANXN3Q5MJ09 141 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 ARMCX6Q7L4S7 300 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 EPHX4Q8IUS5 362 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 CCNYL1Q8N7R7 359 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 ZNF461Q8TAF7 563 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 HTR3CQ8WXA8 447 aa15.01□□□□□ -0.01
CCHCR1-201ENST00000376266 FCRL3Q96P31 734 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms