RNA–Protein interactions for RNA: ENST00000376233.7

ZNF549-202, Transcript of zinc finger protein 549, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF549, Length 4,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549-202ENST00000376233 PGAP3Q96FM1 320 aaPredicted RBP10.57□□□□□ -0.72
ZNF549-202ENST00000376233 TMEM169Q96HH4 297 aa10.57□□□□□ -0.72
ZNF549-202ENST00000376233 SMIM14Q96QK8 99 aa10.57□□□□□ -0.72
ZNF549-202ENST00000376233 PHF12Q96QT6 1004 aa10.57□□□□□ -0.72
ZNF549-202ENST00000376233 ASB8Q9H765 288 aa10.57□□□□□ -0.72
ZNF549-202ENST00000376233 GALPQ9UBC7 116 aa10.57□□□□□ -0.72
ZNF549-202ENST00000376233 LIMD1Q9UGP4 676 aa10.57□□□□□ -0.72
ZNF549-202ENST00000376233 C1RP00736 705 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 CNPP09543 421 aaKnown RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 FAM163BP0C2L3 166 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 PKMP14618 531 aaKnown RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 CORO1AP31146 461 aaKnown RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 GGT5P36269 586 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 RECQLP46063 649 aaPredicted RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 HERVK_113P63132 956 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 TRAF2Q12933 501 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 SEMA3BQ13214 749 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 NADK2Q4G0N4 442 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 OR52E8Q6IFG1 317 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 UGT3A1Q6NUS8 523 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 IFNL1Q8IU54 200 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 CAMK1DQ8IU85 385 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 NKAPQ8N5F7 415 aaKnown RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 OR2T34Q8NGX1 318 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 OR2T3Q8NH03 318 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 DGCR14Q96DF8 476 aaKnown RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 NRBF2Q96F24 287 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 IMP4Q96G21 291 aaKnown RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 ASB2Q96Q27 587 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 ERVK-6Q9BXR3 956 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 TBL1XO60907 577 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 SEC22BO75396 215 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 BCAS2O75934 225 aaPredicted RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 RPLP2P05387 115 aaKnown RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 HIST1H2AGP0C0S8 130 aaPredicted RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 HIST1H2ADP20671 130 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 ITGALP20701 1170 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 HOXD10P28358 340 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 KPNA1P52294 538 aaPredicted RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 DIO3P55073 304 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 RPL38P63173 70 aaKnown RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 SMAD3P84022 425 aaKnown RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 RAB41Q5JT25 222 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 MORN1Q5T089 497 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 DHRSXQ8N5I4 330 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 HIST1H2AHQ96KK5 128 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 RPL10LQ96L21 214 aaKnown RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 TCF12Q99081 682 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 HIST1H2AJQ99878 128 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 H2AFJQ9BTM1 129 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 TRIM54Q9BYV2 358 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 MFSD1Q9H3U5 465 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 ANAPC2Q9UJX6 822 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 SH3BP1Q9Y3L3 701 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 COMMD3-BMI1R4GMX3 469 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 AGTR2P50052 363 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 YBEYP58557 167 aaPredicted RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 LCP2Q13094 533 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 GRB7Q14451 532 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 ZNF423Q2M1K9 1284 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 ATXN7L2Q5T6C5 722 aaPredicted RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 PHC3Q8NDX5 983 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 ASB9Q96DX5 294 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 RAB26Q9ULW5 256 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 EIF3LQ9Y262 564 aaKnown RBP10.56□□□□□ -0.72
ZNF549-202ENST00000376233 SNX5Q9Y5X3 404 aa10.56□□□□□ -0.72
ZNF549-202ENST00000376233 C1orf232A0A0U1RR37 186 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 HAS3O00219 553 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 ACSL4O60488 711 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 SNAP91O60641 907 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 SLC22A3O75751 556 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 CLIC3O95833 236 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 S1PR4O95977 384 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 NR1H2P55055 460 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 GK3PQ14409 553 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 PGS1Q32NB8 556 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 PIGGQ5H8A4 983 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 RABL3Q5HYI8 236 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 SMYD5Q6GMV2 418 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 FUT10Q6P4F1 479 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 C16orf87Q6PH81 154 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 CLEC14AQ86T13 490 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 LSMEM2Q8N112 164 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 SEPT8Q92599 483 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 GFM2Q969S9 779 aaKnown RBP10.55□□□□□ -0.72
ZNF549-202ENST00000376233 RTP3Q9BQQ7 232 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 DPY30Q9C005 99 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 GMPR2Q9P2T1 348 aaKnown RBP10.55□□□□□ -0.72
ZNF549-202ENST00000376233 ZNF711Q9Y462 761 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 SHROOM3Q8TF72 1996 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 PRORSD1PA6NEY8 169 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 TCAF2A6NFQ2 919 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 HHLA1C9JL84 531 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 FKBP9O95302 570 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 IDO1P14902 403 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 HOXB8P17481 243 aaPredicted RBP10.55□□□□□ -0.72
ZNF549-202ENST00000376233 WEE1P30291 646 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 HTR7P34969 479 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 TTPAP49638 278 aa10.55□□□□□ -0.72
ZNF549-202ENST00000376233 PRKG2Q13237 762 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms