RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 ITKQ08881 620 aa23.07■■□□□ 1.28
C9orf47-202ENST00000375850 HADHQ16836 314 aaKnown RBP23.07■■□□□ 1.28
C9orf47-202ENST00000375850 DCAF12Q5T6F0 453 aa23.07■■□□□ 1.28
C9orf47-202ENST00000375850 FAM71BQ8TC56 605 aa23.07■■□□□ 1.28
C9orf47-202ENST00000375850 PTCD2Q8WV60 388 aaKnown RBP23.07■■□□□ 1.28
C9orf47-202ENST00000375850 SH3KBP1Q96B97 665 aa23.07■■□□□ 1.28
C9orf47-202ENST00000375850 COX14Q96I36 57 aa23.07■■□□□ 1.28
C9orf47-202ENST00000375850 CATSPER2Q96P56 530 aa23.07■■□□□ 1.28
C9orf47-202ENST00000375850 SLC38A3Q99624 504 aa23.07■■□□□ 1.28
C9orf47-202ENST00000375850 FUCA2Q9BTY2 467 aa23.07■■□□□ 1.28
C9orf47-202ENST00000375850 SLC12A9Q9BXP2 914 aa23.07■■□□□ 1.28
C9orf47-202ENST00000375850 ZMYND15Q9H091 742 aa23.07■■□□□ 1.28
C9orf47-202ENST00000375850 SLC25A18Q9H1K4 315 aa23.07■■□□□ 1.28
C9orf47-202ENST00000375850 SPTA1P02549 2419 aa23.07■■□□□ 1.28
C9orf47-202ENST00000375850 ARHGEF17Q96PE2 2063 aaPredicted RBP23.06■■□□□ 1.28
C9orf47-202ENST00000375850 SUV39H1O43463 412 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 PDHA1P08559 390 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 SLC2A4P14672 509 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 TCF4P15884 667 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 WT1P19544 449 aaPredicted RBP23.06■■□□□ 1.28
C9orf47-202ENST00000375850 UGT1A3P35503 534 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 GARSP41250 739 aaKnown RBP23.06■■□□□ 1.28
C9orf47-202ENST00000375850 ZNF165P49910 485 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 STC1P52823 247 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 SLC25A11Q02978 314 aaKnown RBP23.06■■□□□ 1.28
C9orf47-202ENST00000375850 ANO6Q4KMQ2 910 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 CCDC122Q5T0U0 273 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 BORAQ6PGQ7 559 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 SFRP1Q8N474 314 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 AVL9Q8NBF6 648 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 HTR3CQ8WXA8 447 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 MAML1Q92585 1016 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 SYN2Q92777 582 aaPredicted RBP23.06■■□□□ 1.28
C9orf47-202ENST00000375850 ART4Q93070 314 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 ZPBPQ9BS86 351 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 RMI1Q9H9A7 625 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 SLC39A1Q9NY26 324 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 CD84Q9UIB8 345 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 TUBD1Q9UJT1 453 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 TMEM98Q9Y2Y6 226 aa23.06■■□□□ 1.28
C9orf47-202ENST00000375850 MATN3O15232 486 aa23.05■■□□□ 1.28
C9orf47-202ENST00000375850 ARHGAP6O43182 974 aa23.05■■□□□ 1.28
C9orf47-202ENST00000375850 CSF2RBP32927 897 aa23.05■■□□□ 1.28
C9orf47-202ENST00000375850 GALNT2Q10471 571 aa23.05■■□□□ 1.28
C9orf47-202ENST00000375850 TDRD12Q587J7 1177 aaKnown RBP23.05■■□□□ 1.28
C9orf47-202ENST00000375850 NKAIN2Q5VXU1 208 aa23.05■■□□□ 1.28
C9orf47-202ENST00000375850 WDR74Q6RFH5 385 aaPredicted RBP23.05■■□□□ 1.28
C9orf47-202ENST00000375850 SLC37A2Q8TED4 501 aa23.05■■□□□ 1.28
C9orf47-202ENST00000375850 SCAMP4Q969E2 229 aa23.05■■□□□ 1.28
C9orf47-202ENST00000375850 LYSMD1Q96S90 227 aa23.05■■□□□ 1.28
C9orf47-202ENST00000375850 EFHD1Q9BUP0 239 aa23.05■■□□□ 1.28
C9orf47-202ENST00000375850 EPB41L1Q9H4G0 881 aa23.05■■□□□ 1.28
C9orf47-202ENST00000375850 SARS2Q9NP81 518 aaKnown RBP23.05■■□□□ 1.28
C9orf47-202ENST00000375850 ANAPC7Q9UJX3 599 aa23.05■■□□□ 1.28
C9orf47-202ENST00000375850 B3GALT1Q9Y5Z6 326 aa23.05■■□□□ 1.28
C9orf47-202ENST00000375850 RGSL1A5PLK6 1076 aa23.04■■□□□ 1.28
C9orf47-202ENST00000375850 MYO1FO00160 1098 aa23.04■■□□□ 1.28
C9orf47-202ENST00000375850 SKILP12757 684 aa23.04■■□□□ 1.28
C9orf47-202ENST00000375850 CCNCP24863 283 aa23.04■■□□□ 1.28
C9orf47-202ENST00000375850 ARSDP51689 593 aa23.04■■□□□ 1.28
C9orf47-202ENST00000375850 PAFAH1B3Q15102 231 aaKnown RBP23.04■■□□□ 1.28
C9orf47-202ENST00000375850 IFI16Q16666 785 aaKnown RBP23.04■■□□□ 1.28
C9orf47-202ENST00000375850 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.04■■□□□ 1.28
C9orf47-202ENST00000375850 CACNA2D3Q8IZS8 1091 aa23.04■■□□□ 1.28
C9orf47-202ENST00000375850 TSGA13Q96PP4 275 aa23.04■■□□□ 1.28
C9orf47-202ENST00000375850 HERPUD2Q9BSE4 406 aa23.04■■□□□ 1.28
C9orf47-202ENST00000375850 TDRD1Q9BXT4 1180 aaKnown RBP23.04■■□□□ 1.28
C9orf47-202ENST00000375850 LDHAL6BQ9BYZ2 381 aaPredicted RBP23.04■■□□□ 1.28
C9orf47-202ENST00000375850 A0A1W2PQJ5 194 aa23.03■■□□□ 1.28
C9orf47-202ENST00000375850 ZNF891A8MT65 544 aaPredicted RBP23.03■■□□□ 1.28
C9orf47-202ENST00000375850 RAD1O60671 282 aa23.03■■□□□ 1.28
C9orf47-202ENST00000375850 ASMTLO95671 621 aa23.03■■□□□ 1.28
C9orf47-202ENST00000375850 MX2P20592 715 aa23.03■■□□□ 1.28
C9orf47-202ENST00000375850 IL4RP24394 825 aa23.03■■□□□ 1.28
C9orf47-202ENST00000375850 EPHA4P54764 986 aa23.03■■□□□ 1.28
C9orf47-202ENST00000375850 CYP4F2P78329 520 aa23.03■■□□□ 1.28
C9orf47-202ENST00000375850 HHEXQ03014 270 aa23.03■■□□□ 1.28
C9orf47-202ENST00000375850 TXNRD3NBQ6F5E7 133 aa23.03■■□□□ 1.28
C9orf47-202ENST00000375850 MARK2Q7KZI7 788 aaKnown RBP23.03■■□□□ 1.28
C9orf47-202ENST00000375850 FAM129CQ86XR2 697 aa23.03■■□□□ 1.28
C9orf47-202ENST00000375850 JPH3Q8WXH2 748 aaPredicted RBP23.03■■□□□ 1.28
C9orf47-202ENST00000375850 IQCDQ96DY2 449 aa23.03■■□□□ 1.28
C9orf47-202ENST00000375850 RIOK2Q9BVS4 552 aaKnown RBP23.03■■□□□ 1.28
C9orf47-202ENST00000375850 NUP85Q9BW27 656 aa23.03■■□□□ 1.28
C9orf47-202ENST00000375850 PLEKHM1Q9Y4G2 1056 aa23.03■■□□□ 1.28
C9orf47-202ENST00000375850 OR5K4A6NMS3 321 aa23.02■■□□□ 1.28
C9orf47-202ENST00000375850 EFCAB7A8K855 629 aa23.02■■□□□ 1.28
C9orf47-202ENST00000375850 PYCARD-AS1I3L0S3 204 aa23.02■■□□□ 1.28
C9orf47-202ENST00000375850 CYP1A2P05177 515 aa23.02■■□□□ 1.28
C9orf47-202ENST00000375850 MAP4P27816 1152 aaKnown RBP23.02■■□□□ 1.28
C9orf47-202ENST00000375850 PPM1FP49593 454 aaPredicted RBP23.02■■□□□ 1.28
C9orf47-202ENST00000375850 PTPRRQ15256 657 aa23.02■■□□□ 1.28
C9orf47-202ENST00000375850 HGSNATQ68CP4 663 aa23.02■■□□□ 1.28
C9orf47-202ENST00000375850 CEACAM20Q6UY09 585 aa23.02■■□□□ 1.28
C9orf47-202ENST00000375850 MAP7D3Q8IWC1 876 aa23.02■■□□□ 1.28
C9orf47-202ENST00000375850 KIAA1143Q96AT1 154 aaPredicted RBP23.02■■□□□ 1.28
C9orf47-202ENST00000375850 SLC45A3Q96JT2 553 aa23.02■■□□□ 1.28
C9orf47-202ENST00000375850 ZNF670Q9BS34 389 aa23.02■■□□□ 1.28
C9orf47-202ENST00000375850 THAP2Q9H0W7 228 aa23.02■■□□□ 1.28
C9orf47-202ENST00000375850 TRIT1Q9H3H1 467 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms