RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 ZCCHC14Q8WYQ9 949 aaKnown RBP9.02□□□□□ -0.97
UBR4-201ENST00000375218 SAMD8Q96LT4 415 aa9.02□□□□□ -0.97
UBR4-201ENST00000375218 FGD4Q96M96 766 aa9.02□□□□□ -0.97
UBR4-201ENST00000375218 RIT2Q99578 217 aa9.02□□□□□ -0.97
UBR4-201ENST00000375218 TRIM15Q9C019 465 aa9.02□□□□□ -0.97
UBR4-201ENST00000375218 ERVK-5Q9HDB9 667 aa9.02□□□□□ -0.97
UBR4-201ENST00000375218 GPRC5CQ9NQ84 441 aa9.02□□□□□ -0.97
UBR4-201ENST00000375218 USP36Q9P275 1121 aaKnown RBP9.02□□□□□ -0.97
UBR4-201ENST00000375218 DAPK2Q9UIK4 370 aa9.02□□□□□ -0.97
UBR4-201ENST00000375218 CLIC4Q9Y696 253 aa9.02□□□□□ -0.97
UBR4-201ENST00000375218 TTLL8A6PVC2 850 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 CST3P01034 146 aaPredicted RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 ATP5C1P36542 298 aaKnown RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 SRSF11Q05519 484 aaKnown RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 TMEM132BQ14DG7 1078 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 PDCD1Q15116 288 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 ATAD3BQ5T9A4 648 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 MAEAQ7L5Y9 396 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 CNGA4Q8IV77 575 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 OR8J2Q8NGG1 315 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 STT3BQ8TCJ2 826 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 CKAP2Q8WWK9 683 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 CRAMP1Q96RY5 1269 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 NDNQ99608 321 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 TAS2R10Q9NYW0 307 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 ZSWIM8A7E2V4 1837 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 ANKRD34BA5PLL1 514 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 DDTLA6NHG4 134 aaPredicted RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 C2CD2LO14523 706 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 GATCO43716 136 aaKnown RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 RECQL5O94762 991 aaPredicted RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 PLEKP08567 350 aaPredicted RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 GNAO1P09471 354 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 DARSP14868 501 aaKnown RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 GPR15P49685 360 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 IST1P53990 364 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 TMEM108Q6UXF1 575 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 C1orf186Q6ZWK4 172 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 USP45Q70EL2 814 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 BZW1Q7L1Q6 419 aaKnown RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 FAM133AQ8N9E0 248 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 NMD3Q96D46 503 aaKnown RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 TMA16Q96EY4 203 aaKnown RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 ZNF668Q96K58 619 aaPredicted RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 B3GALT6Q96L58 329 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 TMEM246Q9BRR3 403 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 BLZF1Q9H2G9 400 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 APEX2Q9UBZ4 518 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 FRYLO94915 3013 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 WDFY4Q6ZS81 3184 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 A0A088AWK7 358 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 A8MXQ7 604 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 FAM47E-STBD1D6RA91 191 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 KRT75O95678 551 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 ITGAXP20702 1163 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 ZNF10P21506 573 aaPredicted RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 ST5P78524 1137 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 RASGEF1BQ0VAM2 473 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 DNAL1Q4LDG9 190 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 C1orf146Q5VVC0 180 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 C4orf22Q6V702 233 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 CATSPERDQ86XM0 798 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 TICAM1Q8IUC6 712 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 TIGD4Q8IY51 512 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 ARFGAP1Q8N6T3 406 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 C4orf32Q8N8J7 132 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 OR10Z1Q8NGY1 313 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 GAD1Q99259 594 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 OR51B6Q9H340 312 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 FAM212BQ9NTI7 297 aaPredicted RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 CYP39A1Q9NYL5 469 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 FZD10Q9ULW2 581 aa9.01□□□□□ -0.97
UBR4-201ENST00000375218 GPC6Q9Y625 555 aaPredicted RBP9.01□□□□□ -0.97
UBR4-201ENST00000375218 ARID2Q68CP9 1835 aa9□□□□□ -0.97
UBR4-201ENST00000375218 EIF2S1P05198 315 aaKnown RBP9□□□□□ -0.97
UBR4-201ENST00000375218 ZCCHC18P0CG32 403 aa9□□□□□ -0.97
UBR4-201ENST00000375218 SFNP31947 248 aa9□□□□□ -0.97
UBR4-201ENST00000375218 PXNP49023 591 aaPredicted RBP9□□□□□ -0.97
UBR4-201ENST00000375218 CLCNKBP51801 687 aa9□□□□□ -0.97
UBR4-201ENST00000375218 SELENOVP59797 346 aa9□□□□□ -0.97
UBR4-201ENST00000375218 TNNC1P63316 161 aa9□□□□□ -0.97
UBR4-201ENST00000375218 MGAT5Q09328 741 aa9□□□□□ -0.97
UBR4-201ENST00000375218 PDCLQ13371 301 aa9□□□□□ -0.97
UBR4-201ENST00000375218 CAPSQ13938 189 aa9□□□□□ -0.97
UBR4-201ENST00000375218 MOXD1Q6UVY6 613 aa9□□□□□ -0.97
UBR4-201ENST00000375218 TREML1Q86YW5 311 aa9□□□□□ -0.97
UBR4-201ENST00000375218 OXR1Q8N573 874 aa9□□□□□ -0.97
UBR4-201ENST00000375218 ENDOVQ8N8Q3 282 aaKnown RBP9□□□□□ -0.97
UBR4-201ENST00000375218 CIDECQ96AQ7 238 aaPredicted RBP9□□□□□ -0.97
UBR4-201ENST00000375218 ABHD17AQ96GS6 310 aa9□□□□□ -0.97
UBR4-201ENST00000375218 TM9SF2Q99805 663 aa9□□□□□ -0.97
UBR4-201ENST00000375218 PSD2Q9BQI7 771 aa9□□□□□ -0.97
UBR4-201ENST00000375218 SH2D3AQ9BRG2 576 aa9□□□□□ -0.97
UBR4-201ENST00000375218 CHMP1AQ9HD42 196 aaPredicted RBP9□□□□□ -0.97
UBR4-201ENST00000375218 CHRAC1Q9NRG0 131 aa9□□□□□ -0.97
UBR4-201ENST00000375218 DZANK1Q9NVP4 752 aa9□□□□□ -0.97
UBR4-201ENST00000375218 FBXW2Q9UKT8 454 aa9□□□□□ -0.97
UBR4-201ENST00000375218 VPS4AQ9UN37 437 aa9□□□□□ -0.97
UBR4-201ENST00000375218 PPIL1Q9Y3C6 166 aa9□□□□□ -0.97
UBR4-201ENST00000375218 LOC390937A0A1W2PQ73 354 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms