RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 PAX7P23759 505 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 LRPAP1P30533 357 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 PYDC2Q56P42 97 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 MARC1Q5VT66 337 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 HIST3H2AQ7L7L0 130 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 PHYKPLQ8IUZ5 450 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 SYT12Q8IV01 421 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 TCP10LQ8TDR4 215 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 AENQ8WTP8 325 aaKnown RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 HIST1H2ACQ93077 130 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 CLIP3Q96DZ5 547 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 MOCOSQ96EN8 888 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 TEFMQ96QE5 360 aaKnown RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 CLK4Q9HAZ1 481 aaKnown RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 SPAG4Q9NPE6 437 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 PTGFRNQ9P2B2 879 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 ZNF222Q9UK12 451 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 DNPEPQ9ULA0 475 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 TOGARAM1Q9Y4F4 1720 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 A0A087X0T9 212 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 KLRG2A4D1S0 409 aaPredicted RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 HEPACAM2A8MVW5 462 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 A8MX80 341 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 CHST10O43529 356 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 CDC40O60508 579 aaKnown RBP eCLIP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 REM1O75628 298 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 UNC5CO95185 931 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 STAU1O95793 577 aaKnown RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 FAM228BP0C875 321 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 PRG2P13727 222 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 ERCC2P18074 760 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 RRM1P23921 792 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 UGT2B15P54855 530 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 CDH4P55283 916 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 USP46P62068 366 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 RBM20Q5T481 1227 aaKnown RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 EMC10Q5UCC4 262 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 USP45Q70EL2 814 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 TFAP2DQ7Z6R9 452 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 ZCCHC9Q8N567 271 aaKnown RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 ZNF75CPQ92670 426 aaPredicted RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 REXO5Q96IC2 774 aaKnown RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 PLEKHG4BQ96PX9 1271 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 FAM118BQ9BPY3 351 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 FANCFQ9NPI8 374 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 OPTCQ9UBM4 332 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 IKZF3Q9UKT9 509 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 SNX6Q9UNH7 406 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 SLC9A8Q9Y2E8 581 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 C4BP0C0L5 1744 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 RHOP08100 348 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 TLX1P31314 330 aaPredicted RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 RPS6KA3P51812 740 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 NME5P56597 212 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 ARHGAP8P85298 464 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 GKN2Q86XP6 184 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 OFCC1Q8IZS5 231 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 FBXL6Q8N531 539 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 IGDCC4Q8TDY8 1250 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 RASSF5Q8WWW0 418 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 MS4A4AQ96JQ5 239 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 GORASP1Q9BQQ3 440 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 CDH7Q9ULB5 785 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 STXBP5LQ9Y2K9 1186 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 SLC27A6Q9Y2P4 619 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 CNTNAP5Q8WYK1 1306 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 B4DGG1 531 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 PGRMC2O15173 223 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 COX7A2P14406 83 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 ATF6P18850 670 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 EIF2S3P41091 472 aaKnown RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 MATKP42679 507 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 CBX5P45973 191 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 MLF2Q15773 248 aaPredicted RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 MORN1Q5T089 497 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 HDAC7Q8WUI4 952 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 KLHDC7BQ96G42 594 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 CRELD1Q96HD1 420 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 SERAC1Q96JX3 654 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 NINJ2Q9NZG7 142 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 ZNF221Q9UK13 617 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 CPQQ9Y646 472 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 R4GN57 208 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 TRBV23OR9-2A0A075B6M9 112 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 CYP2F1P24903 491 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 UGT1A5P35504 534 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 RFX5P48382 616 aaPredicted RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 ZNF844Q08AG5 666 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 SPEM2Q0P670 501 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 ST3GAL1Q11201 340 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 TMEM240Q5SV17 173 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 SWT1Q5T5J6 900 aaKnown RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 ERMARDQ5T6L9 678 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 TXNDC11Q6PKC3 985 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 GATAD2AQ86YP4 633 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 TEX19Q8NA77 164 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 MINDY2Q8NBR6 621 aa6.28□□□□□ -1.4
PTPN3-202ENST00000374541 BHLHE22Q8NFJ8 381 aaPredicted RBP6.28□□□□□ -1.4
PTPN3-202ENST00000374541 HTR3CQ8WXA8 447 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms