RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 CYP4B1P13584 511 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 SFSWAPQ12872 951 aaKnown RBP17.36■□□□□ 0.37
PTPRU-202ENST00000373779 AP5B1Q2VPB7 878 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 CCNYL2Q5T2Q4 361 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 HECTD3Q5T447 861 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 TYW3Q6IPR3 259 aaKnown RBP17.36■□□□□ 0.37
PTPRU-202ENST00000373779 TDRD1Q9BXT4 1180 aaKnown RBP17.36■□□□□ 0.37
PTPRU-202ENST00000373779 ZNHIT2Q9UHR6 403 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 MFHAS1Q9Y4C4 1052 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 IFRD1O00458 451 aaPredicted RBP17.36■□□□□ 0.37
PTPRU-202ENST00000373779 SLC7A4O43246 635 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 GRIN3BO60391 1043 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 ZBTB11O95625 1053 aaPredicted RBP17.36■□□□□ 0.37
PTPRU-202ENST00000373779 NTRK1P04629 796 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 NCK1P16333 377 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 CRATP43155 626 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 CRYBG2Q8N1P7 616 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 RBM4BQ9BQ04 359 aaKnown RBP17.36■□□□□ 0.37
PTPRU-202ENST00000373779 RBM4Q9BWF3 364 aaKnown RBP17.36■□□□□ 0.37
PTPRU-202ENST00000373779 SUCOQ9UBS9 1254 aaKnown RBP17.36■□□□□ 0.37
PTPRU-202ENST00000373779 PSAT1Q9Y617 370 aa17.36■□□□□ 0.37
PTPRU-202ENST00000373779 PRR23D1E9PI22 279 aaPredicted RBP17.35■□□□□ 0.37
PTPRU-202ENST00000373779 RFXANKO14593 260 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 PRR23D2P0DMB1 279 aaPredicted RBP17.35■□□□□ 0.37
PTPRU-202ENST00000373779 SPIDRQ14159 915 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 CPSF6Q16630 551 aaKnown RBP eCLIP17.35■□□□□ 0.37
PTPRU-202ENST00000373779 POC5Q8NA72 575 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 PDPRQ8NCN5 879 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 SLC39A8Q9C0K1 460 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 XYLT2Q9H1B5 865 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 U3KQV3 271 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 TJP1Q07157 1748 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 NDST3O95803 873 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 GOT2P00505 430 aaKnown RBP17.35■□□□□ 0.37
PTPRU-202ENST00000373779 DBTP11182 482 aaKnown RBP17.35■□□□□ 0.37
PTPRU-202ENST00000373779 ALDH9A1P49189 494 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 SLC16A1P53985 500 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 TUSC3Q13454 348 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 ZCCHC8Q6NZY4 707 aaKnown RBP17.35■□□□□ 0.37
PTPRU-202ENST00000373779 CLEC20AQ6ZU45 233 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 KCTD8Q6ZWB6 473 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 USP45Q70EL2 814 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 ITIH5Q86UX2 942 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 ZC3HC1Q86WB0 502 aaKnown RBP17.35■□□□□ 0.37
PTPRU-202ENST00000373779 PARP8Q8N3A8 854 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 KBTBD8Q8NFY9 601 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 GPR152Q8TDT2 470 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 PRR11Q96HE9 360 aaPredicted RBP17.35■□□□□ 0.37
PTPRU-202ENST00000373779 AHSPQ9NZD4 102 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 SLC27A5Q9Y2P5 690 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 TREHO43280 583 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 FAM189A1O60320 539 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 DLX3O60479 287 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 TULP3O75386 442 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 CNPP09543 421 aaKnown RBP17.35■□□□□ 0.37
PTPRU-202ENST00000373779 PLD1Q13393 1074 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 FBXO48Q5FWF7 155 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 LYPLAL1Q5VWZ2 237 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 C2orf49Q9BVC5 232 aaPredicted RBP17.35■□□□□ 0.37
PTPRU-202ENST00000373779 MYL12BO14950 172 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 DNAJA2O60884 412 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 PPP2R1BP30154 601 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 CDC42P60953 191 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 GALNT18Q6P9A2 607 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 SAPCD2Q86UD0 394 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 TRPC4Q9UBN4 977 aa17.35■□□□□ 0.37
PTPRU-202ENST00000373779 MYH11P35749 1972 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 ZNF487B1APH4 448 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 TMEM233B4DJY2 109 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 PPEF2O14830 753 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 ALOX5P09917 674 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 MAP2K5Q13163 448 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 CMPK2Q5EBM0 449 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 INTS11Q5TA45 600 aaKnown RBP17.34■□□□□ 0.37
PTPRU-202ENST00000373779 TOP1MTQ969P6 601 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 HMCESQ96FZ2 354 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 PANX1Q96RD7 426 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 GPR22Q99680 433 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 ZBTB26Q9HCK0 441 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 EHD3Q9NZN3 535 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 ADAM30Q9UKF2 790 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 AKAP11Q9UKA4 1901 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 EDIL3O43854 480 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 TLR5O60602 858 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 MTTPP55157 894 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 NRG1Q02297 640 aaPredicted RBP17.34■□□□□ 0.37
PTPRU-202ENST00000373779 PHKG1Q16816 387 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 TLDC1Q6P9B6 456 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 TSEN34Q9BSV6 310 aaKnown RBP17.34■□□□□ 0.37
PTPRU-202ENST00000373779 TM6SF2Q9BZW4 377 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 STARD7Q9NQZ5 370 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 AQP12BA6NM10 295 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 HNRNPDQ14103 355 aaKnown RBP17.34■□□□□ 0.37
PTPRU-202ENST00000373779 PAFAH1B3Q15102 231 aaKnown RBP17.34■□□□□ 0.37
PTPRU-202ENST00000373779 NOMO2Q5JPE7 1267 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 EGFLAMQ63HQ2 1017 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 AQP12AQ8IXF9 295 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 RBFAQ8N0V3 343 aa17.34■□□□□ 0.37
PTPRU-202ENST00000373779 KRCC1Q9NPI7 259 aaPredicted RBP17.34■□□□□ 0.37
PTPRU-202ENST00000373779 CLCA2Q9UQC9 943 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms