RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 GPR27Q9NS67 375 aa18.46■□□□□ 0.55
CDX4-201ENST00000373514 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.46■□□□□ 0.55
CDX4-201ENST00000373514 HACD3Q9P035 362 aa18.46■□□□□ 0.55
CDX4-201ENST00000373514 ZNF292O60281 2723 aa18.46■□□□□ 0.55
CDX4-201ENST00000373514 BPTFQ12830 3046 aa18.46■□□□□ 0.55
CDX4-201ENST00000373514 CCL22O00626 93 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 ARHGAP33O14559 1287 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 DNALI1O14645 258 aaPredicted RBP18.45■□□□□ 0.54
CDX4-201ENST00000373514 TP73O15350 636 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 GPR39O43194 453 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 GDF9O60383 454 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 HMGCLP35914 325 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 CTSKP43235 329 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 ITGA8P53708 1063 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 PDE1CQ14123 709 aaPredicted RBP18.45■□□□□ 0.54
CDX4-201ENST00000373514 AASDHQ4L235 1098 aaPredicted RBP18.45■□□□□ 0.54
CDX4-201ENST00000373514 CCDC38Q502W7 563 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 PNCKQ6P2M8 343 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 ALYREFQ86V81 257 aaKnown RBP18.45■□□□□ 0.54
CDX4-201ENST00000373514 KIAA2013Q8IYS2 634 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 OR13C4Q8NGS5 318 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 CAVIN3Q969G5 261 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 FMO2Q99518 471 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 EDEM2Q9BV94 578 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 FAM129AQ9BZQ8 928 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 TRABDQ9H4I3 376 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 ZNF446Q9NWS9 450 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 IL17CQ9P0M4 197 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 ANAPC5Q9UJX4 755 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 PNMA8BQ9ULN7 279 aaPredicted RBP18.45■□□□□ 0.54
CDX4-201ENST00000373514 KNL1Q8NG31 2342 aa18.45■□□□□ 0.54
CDX4-201ENST00000373514 FADS2P1A8MWK0 482 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 GOLGA8MH3BSY2 632 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 MAGEA6P43360 314 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 ZNF140P52738 457 aaPredicted RBP18.44■□□□□ 0.54
CDX4-201ENST00000373514 CRADDP78560 199 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 TAF1AQ15573 450 aaPredicted RBP18.44■□□□□ 0.54
CDX4-201ENST00000373514 HENMT1Q5T8I9 393 aaKnown RBP18.44■□□□□ 0.54
CDX4-201ENST00000373514 KCTD16Q68DU8 428 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 TRIM74Q86UV6 250 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 HEATR4Q86WZ0 1026 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 APOOQ9BUR5 198 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 LGR4Q9BXB1 951 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 ZFC3H1O60293 1989 aaKnown RBP18.44■□□□□ 0.54
CDX4-201ENST00000373514 RIF1Q5UIP0 2472 aaKnown RBP18.44■□□□□ 0.54
CDX4-201ENST00000373514 GVINP1Q7Z2Y8 2422 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 LDB2O43679 373 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 RABIFP47224 123 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 SESN2P58004 480 aaPredicted RBP18.44■□□□□ 0.54
CDX4-201ENST00000373514 TMPRSS15P98073 1019 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 IL9RQ01113 521 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 CAV1Q03135 178 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 RNASEH2BQ5TBB1 312 aaKnown RBP18.44■□□□□ 0.54
CDX4-201ENST00000373514 ZNF765Q7L2R6 523 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 IQCHQ86VS3 1027 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 NRSN1Q8IZ57 195 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 OR4K2Q8NGD2 314 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 BRSK1Q8TDC3 778 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 SRPK1Q96SB4 655 aaKnown RBP18.44■□□□□ 0.54
CDX4-201ENST00000373514 FAM83DQ9H4H8 585 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 WDR26Q9H7D7 661 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 MTRF1LQ9UGC7 380 aaKnown RBP18.44■□□□□ 0.54
CDX4-201ENST00000373514 FKBPLQ9UIM3 349 aa18.44■□□□□ 0.54
CDX4-201ENST00000373514 GAPDHSO14556 408 aaPredicted RBP18.43■□□□□ 0.54
CDX4-201ENST00000373514 INPP4BO15327 924 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 AVILO75366 819 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 TSHRP16473 764 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 CA5AP35218 305 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 GPR1P46091 355 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 CDK3Q00526 305 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 DPTQ07507 201 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 FZD2Q14332 565 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 HLA-BQ31612 363 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 ZNF542PQ5EBM4 170 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 HIBCHQ6NVY1 386 aaPredicted RBP18.43■□□□□ 0.54
CDX4-201ENST00000373514 FAM151BQ6UXP7 276 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 MINDY1Q8N5J2 469 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 NAT8LQ8N9F0 302 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 DNAJC1Q96KC8 554 aaKnown RBP18.43■□□□□ 0.54
CDX4-201ENST00000373514 GAREM1Q9H706 876 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 SYBUQ9NX95 663 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 PKP3Q9Y446 797 aa18.43■□□□□ 0.54
CDX4-201ENST00000373514 SPTY2D1-AS1A0A0U1RR47 76 aa18.42■□□□□ 0.54
CDX4-201ENST00000373514 NDC80O14777 642 aa18.42■□□□□ 0.54
CDX4-201ENST00000373514 SCAMP1O15126 338 aa18.42■□□□□ 0.54
CDX4-201ENST00000373514 STX7O15400 261 aaKnown RBP18.42■□□□□ 0.54
CDX4-201ENST00000373514 CRTAMO95727 393 aa18.42■□□□□ 0.54
CDX4-201ENST00000373514 SYPP08247 313 aa18.42■□□□□ 0.54
CDX4-201ENST00000373514 LPOP22079 712 aaPredicted RBP18.42■□□□□ 0.54
CDX4-201ENST00000373514 MGAT1P26572 445 aa18.42■□□□□ 0.54
CDX4-201ENST00000373514 SPAM1P38567 509 aa18.42■□□□□ 0.54
CDX4-201ENST00000373514 THOP1P52888 689 aa18.42■□□□□ 0.54
CDX4-201ENST00000373514 DCDC1P59894 354 aa18.42■□□□□ 0.54
CDX4-201ENST00000373514 OVGP1Q12889 678 aa18.42■□□□□ 0.54
CDX4-201ENST00000373514 NFATC4Q14934 902 aa18.42■□□□□ 0.54
CDX4-201ENST00000373514 PCGF5Q86SE9 256 aa18.42■□□□□ 0.54
CDX4-201ENST00000373514 CAND1Q86VP6 1230 aaKnown RBP18.42■□□□□ 0.54
CDX4-201ENST00000373514 PPIL6Q8IXY8 311 aa18.42■□□□□ 0.54
CDX4-201ENST00000373514 PTCD2Q8WV60 388 aaKnown RBP18.42■□□□□ 0.54
CDX4-201ENST00000373514 SPATA16Q9BXB7 569 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms