RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 SPINT3P49223 89 aa18.78■□□□□ 0.6
TMEM53-201ENST00000372235 ACTR1AP61163 376 aa18.78■□□□□ 0.6
TMEM53-201ENST00000372235 SKOR1P84550 965 aa18.78■□□□□ 0.6
TMEM53-201ENST00000372235 CTBSQ01459 385 aa18.78■□□□□ 0.6
TMEM53-201ENST00000372235 ZFP36L1Q07352 338 aaKnown RBP18.78■□□□□ 0.6
TMEM53-201ENST00000372235 TBX2Q13207 712 aaPredicted RBP18.78■□□□□ 0.6
TMEM53-201ENST00000372235 SOWAHCQ53LP3 525 aaPredicted RBP18.78■□□□□ 0.6
TMEM53-201ENST00000372235 KCTD16Q68DU8 428 aa18.78■□□□□ 0.6
TMEM53-201ENST00000372235 PDPK2PQ6A1A2 396 aa18.78■□□□□ 0.6
TMEM53-201ENST00000372235 SLC30A9Q6PML9 568 aa18.78■□□□□ 0.6
TMEM53-201ENST00000372235 SCAMP4Q969E2 229 aa18.78■□□□□ 0.6
TMEM53-201ENST00000372235 IMP4Q96G21 291 aaKnown RBP18.78■□□□□ 0.6
TMEM53-201ENST00000372235 PRR11Q96HE9 360 aaPredicted RBP18.78■□□□□ 0.6
TMEM53-201ENST00000372235 COX14Q96I36 57 aa18.78■□□□□ 0.6
TMEM53-201ENST00000372235 OLFM3Q96PB7 478 aa18.78■□□□□ 0.6
TMEM53-201ENST00000372235 RIOK2Q9BVS4 552 aaKnown RBP18.78■□□□□ 0.6
TMEM53-201ENST00000372235 ZFYVE1Q9HBF4 777 aa18.78■□□□□ 0.6
TMEM53-201ENST00000372235 MAGEE1Q9HCI5 957 aa18.78■□□□□ 0.6
TMEM53-201ENST00000372235 SPATS2LQ9NUQ6 558 aaKnown RBP18.78■□□□□ 0.6
TMEM53-201ENST00000372235 ASXL3Q9C0F0 2248 aa18.78■□□□□ 0.6
TMEM53-201ENST00000372235 IPO7O95373 1038 aaKnown RBP18.77■□□□□ 0.6
TMEM53-201ENST00000372235 ASMTLO95671 621 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 COMTP21964 271 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 UGT1A5P35504 534 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 CXADRP78310 365 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 RHDQ02161 417 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 QPCTQ16769 361 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 MAP9Q49MG5 647 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 PYCR3Q53H96 274 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 TEX44Q53QW1 395 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 TMEM164Q5U3C3 297 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 DOK6Q6PKX4 331 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 NRROSQ86YC3 692 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 RNF25Q96BH1 459 aaPredicted RBP18.77■□□□□ 0.6
TMEM53-201ENST00000372235 NAF1Q96HR8 494 aaKnown RBP18.77■□□□□ 0.6
TMEM53-201ENST00000372235 VAT1Q99536 393 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 FERMT1Q9BQL6 677 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 ZSCAN5AQ9BUG6 496 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 SUDS3Q9H7L9 328 aaPredicted RBP18.77■□□□□ 0.6
TMEM53-201ENST00000372235 ACSL6Q9UKU0 697 aa18.77■□□□□ 0.6
TMEM53-201ENST00000372235 A0A0A6YYK5 440 aaPredicted RBP18.76■□□□□ 0.59
TMEM53-201ENST00000372235 HGSO14964 777 aaPredicted RBP18.76■□□□□ 0.59
TMEM53-201ENST00000372235 NVLO15381 856 aaKnown RBP18.76■□□□□ 0.59
TMEM53-201ENST00000372235 LCA5LO95447 670 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 ECEL1O95672 775 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 FUCA1P04066 466 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 MMP2P08253 660 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 CD82P27701 267 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 POLD2P49005 469 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 DCDC1P59894 354 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 GPLD1P80108 840 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 B4GALNT1Q00973 533 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 CDK18Q07002 472 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 ZBTB17Q13105 803 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 TRA2AQ13595 282 aaKnown RBP eCLIP18.76■□□□□ 0.59
TMEM53-201ENST00000372235 TFDP3Q5H9I0 405 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 HENMT1Q5T8I9 393 aaKnown RBP18.76■□□□□ 0.59
TMEM53-201ENST00000372235 NYAP1Q6ZVC0 841 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 RCOR2Q8IZ40 523 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 CNTD1Q8N815 330 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 TFB1MQ8WVM0 346 aaKnown RBP18.76■□□□□ 0.59
TMEM53-201ENST00000372235 P3H4Q92791 437 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 SH3KBP1Q96B97 665 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 RBM41Q96IZ5 413 aaKnown RBP18.76■□□□□ 0.59
TMEM53-201ENST00000372235 AGAP3Q96P47 875 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 SEPT10Q9P0V9 454 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 LOXL2Q9Y4K0 774 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 RP1P56715 2156 aa18.76■□□□□ 0.59
TMEM53-201ENST00000372235 COL27A1Q8IZC6 1860 aaPredicted RBP18.75■□□□□ 0.59
TMEM53-201ENST00000372235 ERVH48-1M5A8F1 160 aa18.75■□□□□ 0.59
TMEM53-201ENST00000372235 ATXN7O15265 892 aaPredicted RBP18.75■□□□□ 0.59
TMEM53-201ENST00000372235 ZRANB2O95218 330 aaKnown RBP eCLIP18.75■□□□□ 0.59
TMEM53-201ENST00000372235 AK4P27144 223 aaPredicted RBP18.75■□□□□ 0.59
TMEM53-201ENST00000372235 ALDH4A1P30038 563 aa18.75■□□□□ 0.59
TMEM53-201ENST00000372235 FASLGP48023 281 aa18.75■□□□□ 0.59
TMEM53-201ENST00000372235 SQSTM1Q13501 440 aa18.75■□□□□ 0.59
TMEM53-201ENST00000372235 ZDHHC20Q5W0Z9 365 aa18.75■□□□□ 0.59
TMEM53-201ENST00000372235 B3GNT8Q7Z7M8 397 aa18.75■□□□□ 0.59
TMEM53-201ENST00000372235 CCDC112Q8NEF3 446 aa18.75■□□□□ 0.59
TMEM53-201ENST00000372235 SNRNP27Q8WVK2 155 aaKnown RBP18.75■□□□□ 0.59
TMEM53-201ENST00000372235 WBP1Q96G27 269 aa18.75■□□□□ 0.59
TMEM53-201ENST00000372235 FOXP3Q9BZS1 431 aa18.75■□□□□ 0.59
TMEM53-201ENST00000372235 CARD9Q9H257 536 aa18.75■□□□□ 0.59
TMEM53-201ENST00000372235 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.75■□□□□ 0.59
TMEM53-201ENST00000372235 NFKBIL1Q9UBC1 381 aaPredicted RBP18.75■□□□□ 0.59
TMEM53-201ENST00000372235 ZNHIT2Q9UHR6 403 aa18.75■□□□□ 0.59
TMEM53-201ENST00000372235 SSUH2Q9Y2M2 353 aa18.75■□□□□ 0.59
TMEM53-201ENST00000372235 TMEM98Q9Y2Y6 226 aa18.75■□□□□ 0.59
TMEM53-201ENST00000372235 ALG6Q9Y672 507 aa18.75■□□□□ 0.59
TMEM53-201ENST00000372235 A0A1W2PNU3 283 aaPredicted RBP18.74■□□□□ 0.59
TMEM53-201ENST00000372235 OR5K4A6NMS3 321 aa18.74■□□□□ 0.59
TMEM53-201ENST00000372235 INPP4BO15327 924 aa18.74■□□□□ 0.59
TMEM53-201ENST00000372235 CST8O60676 142 aa18.74■□□□□ 0.59
TMEM53-201ENST00000372235 ZNF189O75820 626 aaPredicted RBP18.74■□□□□ 0.59
TMEM53-201ENST00000372235 TNNT1P13805 278 aa18.74■□□□□ 0.59
TMEM53-201ENST00000372235 CDKN2BP42772 138 aa18.74■□□□□ 0.59
TMEM53-201ENST00000372235 MAZP56270 477 aaKnown RBP18.74■□□□□ 0.59
TMEM53-201ENST00000372235 DYNLT1P63172 113 aa18.74■□□□□ 0.59
TMEM53-201ENST00000372235 VAC14Q08AM6 782 aa18.74■□□□□ 0.59
TMEM53-201ENST00000372235 IHHQ14623 411 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms