RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 DYNC1I1O14576 645 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 APOL1O14791 398 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 TTI1O43156 1089 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 LIASO43766 372 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 PRAMEF12O95522 483 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 FGF19O95750 216 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 APOC2P02655 101 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 ETS1P14921 441 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 BMP7P18075 431 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 TACR2P21452 398 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 CORO1AP31146 461 aaKnown RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 CASP2P42575 452 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 SGSHP51688 502 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 TPI1P60174 286 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 PAFAH1B3Q15102 231 aaKnown RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 NOMO1Q15155 1222 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 GPR19Q15760 415 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 ANO4Q32M45 955 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 PLEKHN1Q494U1 663 aaPredicted RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 C5orf22Q49AR2 442 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 HABP4Q5JVS0 413 aaKnown RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 RWDD4Q6NW29 188 aaKnown RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 DRICH1Q6PGQ1 229 aaPredicted RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 CCDC137Q6PK04 289 aaKnown RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 PDZD4Q76G19 769 aaPredicted RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 GPR149Q86SP6 731 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 NLRP14Q86W24 1093 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 LYSMD2Q8IV50 215 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 UNC45BQ8IWX7 931 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 RBM12BQ8IXT5 1001 aaKnown RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 CMTM8Q8IZV2 173 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 LGI2Q8N0V4 545 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 CFAP52Q8N1V2 620 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 NPWQ8N729 165 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 GLIS1Q8NBF1 620 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 TSPEARQ8WU66 669 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 MAIP1Q8WWC4 291 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 LRTOMTQ8WZ04 291 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 DLG3Q92796 817 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 USP13Q92995 863 aaPredicted RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 NKD2Q969F2 451 aaPredicted RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 AZIN2Q96A70 460 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 RSPRY1Q96DX4 576 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 LRRC3BQ96PB8 259 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 PNKPQ96T60 521 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 TRIM51Q9BSJ1 452 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 KRTAP4-9Q9BYQ8 210 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 S1PR5Q9H228 398 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 POFUT1Q9H488 388 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 TASP1Q9H6P5 420 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 SFXN1Q9H9B4 322 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 ARFGAP3Q9NP61 516 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 ITM2CQ9NQX7 267 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 TMEM51Q9NW97 253 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 DTLQ9NZJ0 730 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 CFAP97Q9P2B7 532 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 PCYOX1Q9UHG3 505 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 DPP7Q9UHL4 492 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 TMPRSS11EQ9UL52 423 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 VANGL2Q9ULK5 521 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 DRG1Q9Y295 367 aaKnown RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 LRCH1Q9Y2L9 728 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 NEU2Q9Y3R4 380 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 HEY1Q9Y5J3 304 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 BRWD1Q9NSI6 2320 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 SZT2Q5T011 3432 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 UQCRHLA0A096LP55 91 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 PRSS38A1L453 326 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 ZSCAN5CA6NGD5 496 aaPredicted RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 J3KRW8 73 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 LEFTY2O00292 366 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 ZNF197O14709 1029 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 DAPK3O43293 454 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 HTRA2O43464 458 aaPredicted RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 MFSD11O43934 449 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 TSPAN3O60637 253 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 UQCRHP07919 91 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 DBHP09172 617 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 ZSCAN5DPP0CG00 497 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 ZFXP17010 805 aaPredicted RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 PFKLP17858 780 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 TGM2P21980 687 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 DDX6P26196 483 aaKnown RBP eCLIP3.61□□□□□ -1.83
MCF2-202ENST00000370573 EPHB2P29323 1055 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 CHRNA3P32297 505 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 FNTAP49354 379 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 HARS2P49590 506 aaKnown RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 VCPP55072 806 aaKnown RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 EIF3EP60228 445 aaKnown RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 RPS24P62847 133 aaKnown RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 DR1Q01658 176 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 GALNT1Q10472 559 aaPredicted RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 BYSLQ13895 437 aaKnown RBP3.61□□□□□ -1.83
MCF2-202ENST00000370573 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.61□□□□□ -1.83
MCF2-202ENST00000370573 DGKKQ5KSL6 1271 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 CATSPEREQ5SY80 951 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 AFMIDQ63HM1 303 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 NUGGCQ68CJ6 796 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 CFAP161Q6P656 301 aa3.61□□□□□ -1.83
MCF2-202ENST00000370573 HTR3DQ70Z44 454 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms