RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 SOD1P00441 154 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 CSF2P04141 144 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 CD59P13987 128 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 TPH1P17752 444 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 LPOP22079 712 aaPredicted RBP14.75□□□□□ -0.05
COL9A1-204ENST00000370496 RXRGP48443 463 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 BLKP51451 505 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 EIF2B5Q13144 721 aaKnown RBP14.75□□□□□ -0.05
COL9A1-204ENST00000370496 SHBQ15464 509 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 ALG11Q2TAA5 492 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 PDPK2PQ6A1A2 396 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 FAM151BQ6UXP7 276 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 RD3Q7Z3Z2 195 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 TRIM74Q86UV6 250 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 NLRP8Q86W28 1048 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 RBFAQ8N0V3 343 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 TRAM1L1Q8N609 369 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 BRSK1Q8TDC3 778 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 BTN2A2Q8WVV5 523 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 ZNF592Q92610 1267 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 HIC2Q96JB3 615 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 LGR4Q9BXB1 951 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 SUDS3Q9H7L9 328 aaPredicted RBP14.75□□□□□ -0.05
COL9A1-204ENST00000370496 FGF22Q9HCT0 170 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 IL17CQ9P0M4 197 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 ASIC3Q9UHC3 531 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 TDRD6O60522 2096 aaKnown RBP14.75□□□□□ -0.05
COL9A1-204ENST00000370496 KNL1Q8NG31 2342 aa14.75□□□□□ -0.05
COL9A1-204ENST00000370496 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.74□□□□□ -0.05
COL9A1-204ENST00000370496 GLYATL1P3A0A0U1RQE8 302 aa14.74□□□□□ -0.05
COL9A1-204ENST00000370496 KIF2AO00139 706 aaPredicted RBP14.74□□□□□ -0.05
COL9A1-204ENST00000370496 PIAS2O75928 621 aa14.74□□□□□ -0.05
COL9A1-204ENST00000370496 HOXC4P09017 264 aaPredicted RBP14.74□□□□□ -0.05
COL9A1-204ENST00000370496 TPSB2P20231 275 aa14.74□□□□□ -0.05
COL9A1-204ENST00000370496 GRK6P43250 576 aa14.74□□□□□ -0.05
COL9A1-204ENST00000370496 ZNF140P52738 457 aaPredicted RBP14.74□□□□□ -0.05
COL9A1-204ENST00000370496 SRP54P61011 504 aaKnown RBP14.74□□□□□ -0.05
COL9A1-204ENST00000370496 PUM1Q14671 1186 aaKnown RBP eCLIP14.74□□□□□ -0.05
COL9A1-204ENST00000370496 TPSAB1Q15661 275 aa14.74□□□□□ -0.05
COL9A1-204ENST00000370496 PHYKPLQ8IUZ5 450 aa14.74□□□□□ -0.05
COL9A1-204ENST00000370496 ZNF548Q8NEK5 533 aaPredicted RBP14.74□□□□□ -0.05
COL9A1-204ENST00000370496 OR4K2Q8NGD2 314 aa14.74□□□□□ -0.05
COL9A1-204ENST00000370496 SAP25Q8TEE9 199 aa14.74□□□□□ -0.05
COL9A1-204ENST00000370496 TSACCQ96A04 125 aaPredicted RBP14.74□□□□□ -0.05
COL9A1-204ENST00000370496 SLC32A1Q9H598 525 aa14.74□□□□□ -0.05
COL9A1-204ENST00000370496 SPASTQ9UBP0 616 aa14.74□□□□□ -0.05
COL9A1-204ENST00000370496 PRSS38A1L453 326 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 TNFRSF10CO14798 259 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 SCAMP1O15126 338 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 FFAR2O15552 330 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 AQP9O43315 295 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 SH3BP5O60239 455 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 PRAMEF1O95521 474 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 ASMTLO95671 621 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 CTSEP14091 401 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 ID4P47928 161 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 HK3P52790 923 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 DR1Q01658 176 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 BNIP3Q12983 259 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 PTK6Q13882 451 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 PTPRCAPQ14761 206 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 TCEA2Q15560 299 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 PRRT3Q5FWE3 981 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 DEFB124Q8NES8 71 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 PPHLN1Q8NEY8 458 aaKnown RBP14.73□□□□□ -0.05
COL9A1-204ENST00000370496 LMX1AQ8TE12 382 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 OR1E3Q8WZA6 343 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 SLCO2A1Q92959 643 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 GLYATL1Q969I3 302 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 LRRC61Q9BV99 259 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 FRMD8Q9BZ67 464 aaPredicted RBP14.73□□□□□ -0.05
COL9A1-204ENST00000370496 TCEAL2Q9H3H9 227 aaPredicted RBP14.73□□□□□ -0.05
COL9A1-204ENST00000370496 CAAP1Q9H8G2 361 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 CARS2Q9HA77 564 aaKnown RBP14.73□□□□□ -0.05
COL9A1-204ENST00000370496 CYP4F12Q9HCS2 524 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 MRPL40Q9NQ50 206 aaKnown RBP14.73□□□□□ -0.05
COL9A1-204ENST00000370496 CASS4Q9NQ75 786 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 DLL3Q9NYJ7 618 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 PCYOX1Q9UHG3 505 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 KLF15Q9UIH9 416 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 FKBPLQ9UIM3 349 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 PNMA8BQ9ULN7 279 aaPredicted RBP14.73□□□□□ -0.05
COL9A1-204ENST00000370496 BTBD3Q9Y2F9 522 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 KCTD3Q9Y597 815 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 CCDC78A2IDD5 438 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 HEATR9A2RTY3 570 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 NEMP2A6NFY4 417 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 AP3B1O00203 1094 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 TNFP01375 233 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 ALPPL2P10696 532 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 DGKAP23743 735 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 HADHAP40939 763 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 GRIA1P42261 906 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 GNPDA1P46926 289 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 NOVA1P51513 510 aaKnown RBP14.73□□□□□ -0.05
COL9A1-204ENST00000370496 SESN2P58004 480 aaPredicted RBP14.73□□□□□ -0.05
COL9A1-204ENST00000370496 SARNPP82979 210 aaKnown RBP14.73□□□□□ -0.05
COL9A1-204ENST00000370496 TMPRSS15P98073 1019 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 CDK16Q00536 496 aa14.73□□□□□ -0.05
COL9A1-204ENST00000370496 CKAP4Q07065 602 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms