RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 PRKAB1Q9Y478 270 aa15.29■□□□□ 0.04
SSR4-204ENST00000370087 LRBAP50851 2863 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 A1L4Q6 167 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 DNAJB5O75953 348 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 PEX11BO96011 259 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 ERCC2P18074 760 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 GPR1P46091 355 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 GFERP55789 205 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 HHEXQ03014 270 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 ERV3-1Q14264 604 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 RFTN1Q14699 578 aaPredicted RBP15.28■□□□□ 0.04
SSR4-204ENST00000370087 LBRQ14739 615 aaKnown RBP15.28■□□□□ 0.04
SSR4-204ENST00000370087 ADAMTSL4Q6UY14 1074 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 RFX8Q6ZV50 586 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 CYP4V2Q6ZWL3 525 aaPredicted RBP15.28■□□□□ 0.04
SSR4-204ENST00000370087 CCDC13Q8IYE1 715 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 SCAMP4Q969E2 229 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 ZPBPQ9BS86 351 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 SNRNP25Q9BV90 132 aaKnown RBP15.28■□□□□ 0.04
SSR4-204ENST00000370087 TBC1D10AQ9BXI6 508 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 NOD2Q9HC29 1040 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 PRDM8Q9NQV8 689 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 FAM207AQ9NSI2 230 aaPredicted RBP15.28■□□□□ 0.04
SSR4-204ENST00000370087 TBC1D29Q9UFV1 150 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 TLK1Q9UKI8 766 aa15.28■□□□□ 0.04
SSR4-204ENST00000370087 OAS3Q9Y6K5 1087 aaKnown RBP15.28■□□□□ 0.04
SSR4-204ENST00000370087 CACNA1DQ01668 2161 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 A6NCN8 305 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 MKRN2OSH3BPM6 223 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 POLR1CO15160 346 aaPredicted RBP15.27■□□□□ 0.04
SSR4-204ENST00000370087 SOCS5O75159 536 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 CALB1P05937 261 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 HTR7P34969 479 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 MAXP61244 160 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 DPTQ07507 201 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 MAP7Q14244 749 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 FHL5Q5TD97 284 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 TMCO4Q5TGY1 634 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 GALNT13Q8IUC8 556 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 ESX1Q8N693 406 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 GALNT6Q8NCL4 622 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 COX14Q96I36 57 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 MCCC1Q96RQ3 725 aaPredicted RBP15.27■□□□□ 0.04
SSR4-204ENST00000370087 TRIM55Q9BYV6 548 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 TRIT1Q9H3H1 467 aaKnown RBP15.27■□□□□ 0.04
SSR4-204ENST00000370087 SARS2Q9NP81 518 aaKnown RBP15.27■□□□□ 0.04
SSR4-204ENST00000370087 OGFRQ9NZT2 677 aa15.27■□□□□ 0.04
SSR4-204ENST00000370087 CSMD1Q96PZ7 3565 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 MN1Q10571 1320 aaPredicted RBP15.26■□□□□ 0.03
SSR4-204ENST00000370087 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.26■□□□□ 0.03
SSR4-204ENST00000370087 CDC14CA4D256 554 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 PSMD11O00231 422 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 INPP4BO15327 924 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 DNAJC6O75061 913 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 RFPL1O75677 317 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 CYP2A6P11509 494 aaPredicted RBP15.26■□□□□ 0.03
SSR4-204ENST00000370087 COL8A1P27658 744 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 MAN1A1P33908 653 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 PMS2P54278 862 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 SH3BP2P78314 561 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 PEX6Q13608 980 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 TCP11X2Q5H9J9 407 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 LRRC66Q68CR7 880 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 ZNF787Q6DD87 383 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 SSC4DQ8WTU2 575 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 AP2M1Q96CW1 435 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 NUDCD1Q96RS6 583 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 ULBP3Q9BZM4 244 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 KCTD5Q9NXV2 234 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 RCOR3Q9P2K3 495 aaPredicted RBP15.26■□□□□ 0.03
SSR4-204ENST00000370087 PCSK1NQ9UHG2 260 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 PHTF1Q9UMS5 762 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 KCNK6Q9Y257 313 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 CENPEQ02224 2701 aa15.26■□□□□ 0.03
SSR4-204ENST00000370087 VPS4BO75351 444 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 PGLSO95336 258 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 ATP1A1P05023 1023 aaKnown RBP15.25■□□□□ 0.03
SSR4-204ENST00000370087 PDHA1P08559 390 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 COPB1P53618 953 aaKnown RBP15.25■□□□□ 0.03
SSR4-204ENST00000370087 DPYSQ14117 519 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 ZNF235Q14590 738 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 NADK2Q4G0N4 442 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 PRR30Q53SZ7 412 aaPredicted RBP15.25■□□□□ 0.03
SSR4-204ENST00000370087 IYDQ6PHW0 289 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 C6orf15Q6UXA7 325 aaPredicted RBP15.25■□□□□ 0.03
SSR4-204ENST00000370087 GALNT11Q8NCW6 608 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 CPT1CQ8TCG5 803 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 PIH1D2Q8WWB5 315 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 SCRN2Q96FV2 425 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 RUFY1Q96T51 708 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 MGME1Q9BQP7 344 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 TRIM7Q9C029 511 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 SEPT11Q9NVA2 429 aaKnown RBP15.25■□□□□ 0.03
SSR4-204ENST00000370087 ETNK2Q9NVF9 386 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 VPS4AQ9UN37 437 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 POLHQ9Y253 713 aa15.25■□□□□ 0.03
SSR4-204ENST00000370087 TTLL8A6PVC2 850 aa15.24■□□□□ 0.03
SSR4-204ENST00000370087 DAPK3O43293 454 aa15.24■□□□□ 0.03
SSR4-204ENST00000370087 ATMINO43313 823 aaPredicted RBP15.24■□□□□ 0.03
SSR4-204ENST00000370087 KATNA1O75449 491 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms