RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 KRT38O76015 456 aa8.8□□□□□ -1
SNX27-201ENST00000368838 GSRP00390 522 aa8.8□□□□□ -1
SNX27-201ENST00000368838 SRPRAP08240 638 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 CD59P13987 128 aa8.8□□□□□ -1
SNX27-201ENST00000368838 NR1D1P20393 614 aa8.8□□□□□ -1
SNX27-201ENST00000368838 MSH2P43246 934 aa8.8□□□□□ -1
SNX27-201ENST00000368838 NUMBP49757 651 aa8.8□□□□□ -1
SNX27-201ENST00000368838 CSRP3P50461 194 aa8.8□□□□□ -1
SNX27-201ENST00000368838 CSE1LP55060 971 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 PPP2R2AP63151 447 aa8.8□□□□□ -1
SNX27-201ENST00000368838 PDE1BQ01064 536 aa8.8□□□□□ -1
SNX27-201ENST00000368838 SLC18A2Q05940 514 aa8.8□□□□□ -1
SNX27-201ENST00000368838 GRIK2Q13002 908 aa8.8□□□□□ -1
SNX27-201ENST00000368838 ZNF234Q14588 700 aa8.8□□□□□ -1
SNX27-201ENST00000368838 EIF4HQ15056 248 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 SLC1A5Q15758 541 aa8.8□□□□□ -1
SNX27-201ENST00000368838 UGP2Q16851 508 aa8.8□□□□□ -1
SNX27-201ENST00000368838 KBTBD12Q3ZCT8 623 aa8.8□□□□□ -1
SNX27-201ENST00000368838 LINC01559Q495D7 138 aa8.8□□□□□ -1
SNX27-201ENST00000368838 ANKRD20A4Q4UJ75 823 aa8.8□□□□□ -1
SNX27-201ENST00000368838 FSCBQ5H9T9 825 aa8.8□□□□□ -1
SNX27-201ENST00000368838 TMEM215Q68D42 235 aa8.8□□□□□ -1
SNX27-201ENST00000368838 PDPK2PQ6A1A2 396 aa8.8□□□□□ -1
SNX27-201ENST00000368838 NCEH1Q6PIU2 408 aa8.8□□□□□ -1
SNX27-201ENST00000368838 CCDC91Q7Z6B0 441 aa8.8□□□□□ -1
SNX27-201ENST00000368838 PIP4P1Q86T03 277 aa8.8□□□□□ -1
SNX27-201ENST00000368838 TMPRSS6Q8IU80 811 aa8.8□□□□□ -1
SNX27-201ENST00000368838 AHI1Q8N157 1196 aa8.8□□□□□ -1
SNX27-201ENST00000368838 CHCHD4Q8N4Q1 142 aa8.8□□□□□ -1
SNX27-201ENST00000368838 PCDH20Q8N6Y1 951 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 DNAAF3Q8N9W5 541 aa8.8□□□□□ -1
SNX27-201ENST00000368838 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.8□□□□□ -1
SNX27-201ENST00000368838 CEP76Q8TAP6 659 aa8.8□□□□□ -1
SNX27-201ENST00000368838 BRSK1Q8TDC3 778 aa8.8□□□□□ -1
SNX27-201ENST00000368838 ZCCHC14Q8WYQ9 949 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 GATA6Q92908 595 aa8.8□□□□□ -1
SNX27-201ENST00000368838 ECHDC3Q96DC8 303 aa8.8□□□□□ -1
SNX27-201ENST00000368838 CERS2Q96G23 380 aa8.8□□□□□ -1
SNX27-201ENST00000368838 PAFAH2Q99487 392 aa8.8□□□□□ -1
SNX27-201ENST00000368838 CPNE1Q99829 537 aa8.8□□□□□ -1
SNX27-201ENST00000368838 SEMA3CQ99985 751 aa8.8□□□□□ -1
SNX27-201ENST00000368838 CINPQ9BW66 212 aaPredicted RBP8.8□□□□□ -1
SNX27-201ENST00000368838 FSD1LQ9BXM9 530 aa8.8□□□□□ -1
SNX27-201ENST00000368838 TDRD1Q9BXT4 1180 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 CEP41Q9BYV8 373 aa8.8□□□□□ -1
SNX27-201ENST00000368838 IL21RQ9HBE5 538 aa8.8□□□□□ -1
SNX27-201ENST00000368838 NT5MQ9NPB1 228 aa8.8□□□□□ -1
SNX27-201ENST00000368838 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.8□□□□□ -1
SNX27-201ENST00000368838 THAP10Q9P2Z0 257 aaPredicted RBP8.8□□□□□ -1
SNX27-201ENST00000368838 LHX3Q9UBR4 397 aa8.8□□□□□ -1
SNX27-201ENST00000368838 VPS51Q9UID3 782 aa8.8□□□□□ -1
SNX27-201ENST00000368838 VPS28Q9UK41 221 aa8.8□□□□□ -1
SNX27-201ENST00000368838 INTS6Q9UL03 887 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 TCAF1Q9Y4C2 921 aa8.8□□□□□ -1
SNX27-201ENST00000368838 SLCO1B1Q9Y6L6 691 aa8.8□□□□□ -1
SNX27-201ENST00000368838 RPS6KL1Q9Y6S9 549 aa8.8□□□□□ -1
SNX27-201ENST00000368838 ACACAQ13085 2346 aa8.8□□□□□ -1
SNX27-201ENST00000368838 NBEAQ8NFP9 2946 aa8.8□□□□□ -1
SNX27-201ENST00000368838 H7C0S8 307 aa8.8□□□□□ -1
SNX27-201ENST00000368838 MUSKO15146 869 aa8.8□□□□□ -1
SNX27-201ENST00000368838 SYNCRIPO60506 623 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 ICMTO60725 284 aa8.8□□□□□ -1
SNX27-201ENST00000368838 TMCC1O94876 653 aa8.8□□□□□ -1
SNX27-201ENST00000368838 MT-CYBP00156 380 aaPredicted RBP8.8□□□□□ -1
SNX27-201ENST00000368838 PRLP01236 227 aa8.8□□□□□ -1
SNX27-201ENST00000368838 EPHX1P07099 455 aa8.8□□□□□ -1
SNX27-201ENST00000368838 INHBAP08476 426 aa8.8□□□□□ -1
SNX27-201ENST00000368838 SNRPAP09012 282 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 PABPC1P11940 636 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 PAMP19021 973 aa8.8□□□□□ -1
SNX27-201ENST00000368838 MGAT1P26572 445 aa8.8□□□□□ -1
SNX27-201ENST00000368838 MZF1P28698 734 aaPredicted RBP8.8□□□□□ -1
SNX27-201ENST00000368838 CD6P30203 668 aa8.8□□□□□ -1
SNX27-201ENST00000368838 HLA-FP30511 346 aa8.8□□□□□ -1
SNX27-201ENST00000368838 GP5P40197 560 aa8.8□□□□□ -1
SNX27-201ENST00000368838 CSKP41240 450 aa8.8□□□□□ -1
SNX27-201ENST00000368838 MAGEA12P43365 314 aa8.8□□□□□ -1
SNX27-201ENST00000368838 ARCN1P48444 511 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 TPMTP51580 245 aa8.8□□□□□ -1
SNX27-201ENST00000368838 MAGOHP61326 146 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 IHHQ14623 411 aa8.8□□□□□ -1
SNX27-201ENST00000368838 DBN1Q16643 649 aa8.8□□□□□ -1
SNX27-201ENST00000368838 LONRF1Q17RB8 773 aa8.8□□□□□ -1
SNX27-201ENST00000368838 UBAP2Q5T6F2 1119 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 GRTP1Q5TC63 336 aa8.8□□□□□ -1
SNX27-201ENST00000368838 SERPINA13PQ6UXR4 307 aa8.8□□□□□ -1
SNX27-201ENST00000368838 CIR1Q86X95 450 aaPredicted RBP8.8□□□□□ -1
SNX27-201ENST00000368838 MPP5Q8N3R9 675 aa8.8□□□□□ -1
SNX27-201ENST00000368838 CARNMT1Q8N4J0 409 aa8.8□□□□□ -1
SNX27-201ENST00000368838 SH2D3CQ8N5H7 860 aa8.8□□□□□ -1
SNX27-201ENST00000368838 GPR150Q8NGU9 434 aa8.8□□□□□ -1
SNX27-201ENST00000368838 SPATA22Q8NHS9 363 aa8.8□□□□□ -1
SNX27-201ENST00000368838 CALML6Q8TD86 181 aa8.8□□□□□ -1
SNX27-201ENST00000368838 EPS8L3Q8TE67 593 aaKnown RBP8.8□□□□□ -1
SNX27-201ENST00000368838 SNX19Q92543 992 aa8.8□□□□□ -1
SNX27-201ENST00000368838 VOPP1Q96AW1 172 aa8.8□□□□□ -1
SNX27-201ENST00000368838 ADGRE3Q9BY15 652 aa8.8□□□□□ -1
SNX27-201ENST00000368838 MUC3BQ9H195 1237 aa8.8□□□□□ -1
SNX27-201ENST00000368838 MTG2Q9H4K7 406 aa8.8□□□□□ -1
SNX27-201ENST00000368838 SYBUQ9NX95 663 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms