RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 CORO1AP31146 461 aaKnown RBP8.83□□□□□ -1
TPM3-213ENST00000368545 HOXA9P31269 272 aa8.83□□□□□ -1
TPM3-213ENST00000368545 MAGEA3P43357 314 aa8.83□□□□□ -1
TPM3-213ENST00000368545 YBEYP58557 167 aaPredicted RBP8.83□□□□□ -1
TPM3-213ENST00000368545 ERVFC1P60507 584 aa8.83□□□□□ -1
TPM3-213ENST00000368545 PARP15Q460N3 678 aa8.83□□□□□ -1
TPM3-213ENST00000368545 FAXCQ5TGI0 409 aa8.83□□□□□ -1
TPM3-213ENST00000368545 CDPF1Q6NVV7 123 aa8.83□□□□□ -1
TPM3-213ENST00000368545 TMEM150AQ86TG1 271 aa8.83□□□□□ -1
TPM3-213ENST00000368545 TP53INP2Q8IXH6 220 aa8.83□□□□□ -1
TPM3-213ENST00000368545 RIBC1Q8N443 379 aaPredicted RBP8.83□□□□□ -1
TPM3-213ENST00000368545 KIAA1958Q8N8K9 716 aa8.83□□□□□ -1
TPM3-213ENST00000368545 ZNF610Q8N9Z0 462 aa8.83□□□□□ -1
TPM3-213ENST00000368545 MRPS31Q92665 395 aaKnown RBP8.83□□□□□ -1
TPM3-213ENST00000368545 ARL8AQ96BM9 186 aa8.83□□□□□ -1
TPM3-213ENST00000368545 SLC39A8Q9C0K1 460 aa8.83□□□□□ -1
TPM3-213ENST00000368545 ZNF334Q9HCZ1 680 aaPredicted RBP8.83□□□□□ -1
TPM3-213ENST00000368545 MPP6Q9NZW5 540 aa8.83□□□□□ -1
TPM3-213ENST00000368545 RSPH14Q9UHP6 348 aa8.83□□□□□ -1
TPM3-213ENST00000368545 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.83□□□□□ -1
TPM3-213ENST00000368545 KANSL1LA0AUZ9 987 aa8.83□□□□□ -1
TPM3-213ENST00000368545 C2orf78A6NCI8 922 aa8.83□□□□□ -1
TPM3-213ENST00000368545 AP3B1O00203 1094 aa8.83□□□□□ -1
TPM3-213ENST00000368545 RGS16O15492 202 aaPredicted RBP8.83□□□□□ -1
TPM3-213ENST00000368545 PSMD3O43242 534 aa8.83□□□□□ -1
TPM3-213ENST00000368545 GSTA2P09210 222 aa8.83□□□□□ -1
TPM3-213ENST00000368545 MBL2P11226 248 aaPredicted RBP8.83□□□□□ -1
TPM3-213ENST00000368545 CCNB1P14635 433 aa8.83□□□□□ -1
TPM3-213ENST00000368545 CLCN4P51793 760 aa8.83□□□□□ -1
TPM3-213ENST00000368545 CSTF1Q05048 431 aaKnown RBP8.83□□□□□ -1
TPM3-213ENST00000368545 GAD2Q05329 585 aa8.83□□□□□ -1
TPM3-213ENST00000368545 CDK5R2Q13319 367 aa8.83□□□□□ -1
TPM3-213ENST00000368545 PRPSAP1Q14558 356 aa8.83□□□□□ -1
TPM3-213ENST00000368545 FASTKD3Q14CZ7 662 aaKnown RBP8.83□□□□□ -1
TPM3-213ENST00000368545 FAM133BQ5BKY9 247 aaKnown RBP8.83□□□□□ -1
TPM3-213ENST00000368545 PPM1LQ5SGD2 360 aa8.83□□□□□ -1
TPM3-213ENST00000368545 NADSYN1Q6IA69 706 aa8.83□□□□□ -1
TPM3-213ENST00000368545 TMC8Q8IU68 726 aa8.83□□□□□ -1
TPM3-213ENST00000368545 PALM2Q8IXS6 379 aa8.83□□□□□ -1
TPM3-213ENST00000368545 TMEFF1Q8IYR6 380 aa8.83□□□□□ -1
TPM3-213ENST00000368545 NETO2Q8NC67 525 aa8.83□□□□□ -1
TPM3-213ENST00000368545 FBXO36Q8NEA4 188 aa8.83□□□□□ -1
TPM3-213ENST00000368545 IGSF8Q969P0 613 aa8.83□□□□□ -1
TPM3-213ENST00000368545 CLDN23Q96B33 292 aa8.83□□□□□ -1
TPM3-213ENST00000368545 CENPHQ9H3R5 247 aa8.83□□□□□ -1
TPM3-213ENST00000368545 VPS37BQ9H9H4 285 aa8.83□□□□□ -1
TPM3-213ENST00000368545 LRRC4CQ9HCJ2 640 aa8.83□□□□□ -1
TPM3-213ENST00000368545 TRPC7Q9HCX4 862 aa8.83□□□□□ -1
TPM3-213ENST00000368545 ASAH2Q9NR71 780 aa8.83□□□□□ -1
TPM3-213ENST00000368545 ZNF212Q9UDV6 495 aa8.83□□□□□ -1
TPM3-213ENST00000368545 FETUBQ9UGM5 382 aa8.83□□□□□ -1
TPM3-213ENST00000368545 PCDHGA5Q9Y5G8 931 aa8.83□□□□□ -1
TPM3-213ENST00000368545 TEX264Q9Y6I9 313 aa8.83□□□□□ -1
TPM3-213ENST00000368545 ZNF561-AS1K7EIQ3 104 aa8.82□□□□□ -1
TPM3-213ENST00000368545 KDM1AO60341 852 aa8.82□□□□□ -1
TPM3-213ENST00000368545 RAMP2O60895 175 aa8.82□□□□□ -1
TPM3-213ENST00000368545 CLASP2O75122 1294 aaKnown RBP8.82□□□□□ -1
TPM3-213ENST00000368545 CDH16O75309 829 aa8.82□□□□□ -1
TPM3-213ENST00000368545 NEBLO76041 1014 aa8.82□□□□□ -1
TPM3-213ENST00000368545 AP2A1O95782 977 aa8.82□□□□□ -1
TPM3-213ENST00000368545 AGTP01019 485 aa8.82□□□□□ -1
TPM3-213ENST00000368545 SPATA31D3P0C874 917 aa8.82□□□□□ -1
TPM3-213ENST00000368545 DDX6P26196 483 aaKnown RBP eCLIP8.82□□□□□ -1
TPM3-213ENST00000368545 GABRR2P28476 465 aa8.82□□□□□ -1
TPM3-213ENST00000368545 OR1E1P30953 314 aa8.82□□□□□ -1
TPM3-213ENST00000368545 PREPP48147 710 aa8.82□□□□□ -1
TPM3-213ENST00000368545 PAPOLAP51003 745 aaKnown RBP8.82□□□□□ -1
TPM3-213ENST00000368545 CDH4P55283 916 aa8.82□□□□□ -1
TPM3-213ENST00000368545 IRF9Q00978 393 aa8.82□□□□□ -1
TPM3-213ENST00000368545 GABPB1Q06547 395 aaPredicted RBP8.82□□□□□ -1
TPM3-213ENST00000368545 ZBTB17Q13105 803 aa8.82□□□□□ -1
TPM3-213ENST00000368545 KRT72Q14CN4 511 aa8.82□□□□□ -1
TPM3-213ENST00000368545 KLHL38Q2WGJ6 581 aa8.82□□□□□ -1
TPM3-213ENST00000368545 SOWAHCQ53LP3 525 aaPredicted RBP8.82□□□□□ -1
TPM3-213ENST00000368545 ALFQ53S48 1182 aa8.82□□□□□ -1
TPM3-213ENST00000368545 ADGRF1Q5T601 910 aa8.82□□□□□ -1
TPM3-213ENST00000368545 LRRC8BQ6P9F7 803 aa8.82□□□□□ -1
TPM3-213ENST00000368545 SPATA31D4Q6ZUB0 917 aa8.82□□□□□ -1
TPM3-213ENST00000368545 CHST9Q7L1S5 443 aa8.82□□□□□ -1
TPM3-213ENST00000368545 OVCH2Q7RTZ1 564 aa8.82□□□□□ -1
TPM3-213ENST00000368545 TFAP2DQ7Z6R9 452 aa8.82□□□□□ -1
TPM3-213ENST00000368545 DENND1CQ8IV53 801 aa8.82□□□□□ -1
TPM3-213ENST00000368545 LGI2Q8N0V4 545 aa8.82□□□□□ -1
TPM3-213ENST00000368545 ARFGAP2Q8N6H7 521 aa8.82□□□□□ -1
TPM3-213ENST00000368545 UHMK1Q8TAS1 419 aaKnown RBP8.82□□□□□ -1
TPM3-213ENST00000368545 DEPDC1BQ8WUY9 529 aa8.82□□□□□ -1
TPM3-213ENST00000368545 NSMCE1Q8WV22 266 aa8.82□□□□□ -1
TPM3-213ENST00000368545 MAML1Q92585 1016 aa8.82□□□□□ -1
TPM3-213ENST00000368545 ZBTB9Q96C00 473 aa8.82□□□□□ -1
TPM3-213ENST00000368545 IL12RB2Q99665 862 aa8.82□□□□□ -1
TPM3-213ENST00000368545 HAUS2Q9NVX0 235 aa8.82□□□□□ -1
TPM3-213ENST00000368545 STOML2Q9UJZ1 356 aa8.82□□□□□ -1
TPM3-213ENST00000368545 AAR2Q9Y312 384 aaKnown RBP8.82□□□□□ -1
TPM3-213ENST00000368545 PCDHGB6Q9Y5F9 930 aa8.82□□□□□ -1
TPM3-213ENST00000368545 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.82□□□□□ -1
TPM3-213ENST00000368545 EPG5Q9HCE0 2579 aa8.81□□□□□ -1
TPM3-213ENST00000368545 MIA3Q5JRA6 1907 aa8.81□□□□□ -1
TPM3-213ENST00000368545 A0A1B0GVM2 712 aa8.81□□□□□ -1
TPM3-213ENST00000368545 EXOC1LA0A1B0GW35 172 aa8.81□□□□□ -1
TPM3-213ENST00000368545 TYW5A2RUC4 315 aaKnown RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms