RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 CCDC122Q5T0U0 273 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 VASH2Q86V25 355 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 RCBTB1Q8NDN9 531 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 ARRDC2Q8TBH0 407 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 TAAR9Q96RI9 348 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 AGAP2Q99490 1192 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 DPYSL5Q9BPU6 564 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 TDRD1Q9BXT4 1180 aaKnown RBP15.93■□□□□ 0.14
CKS1B-202ENST00000368436 CAPN11Q9UMQ6 739 aa15.93■□□□□ 0.14
CKS1B-202ENST00000368436 FASLGP48023 281 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 FANCCQ00597 558 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 DSC2Q02487 901 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 IFI16Q16666 785 aaKnown RBP15.92■□□□□ 0.14
CKS1B-202ENST00000368436 ANKRD20A8PQ5CZ79 823 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 NKAIN2Q5VXU1 208 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 CAVIN1Q6NZI2 390 aaKnown RBP15.92■□□□□ 0.14
CKS1B-202ENST00000368436 ALKBH5Q6P6C2 394 aaKnown RBP15.92■□□□□ 0.14
CKS1B-202ENST00000368436 TRIM74Q86UV6 250 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 ZSCAN1Q8NBB4 408 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 EXD1Q8NHP7 514 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 EXTL1Q92935 676 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 LYSMD1Q96S90 227 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 ZNF670Q9BS34 389 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 RIOK2Q9BVS4 552 aaKnown RBP15.92■□□□□ 0.14
CKS1B-202ENST00000368436 RBM22Q9NW64 420 aaKnown RBP eCLIP15.92■□□□□ 0.14
CKS1B-202ENST00000368436 PDP2Q9P2J9 529 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 DNPEPQ9ULA0 475 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 NENFQ9UMX5 172 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 CHKBQ9Y259 395 aa15.92■□□□□ 0.14
CKS1B-202ENST00000368436 FLNBO75369 2602 aaKnown RBP15.92■□□□□ 0.14
CKS1B-202ENST00000368436 STMND1H3BQB6 276 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 THRAP10827 490 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 ITGB6P18564 788 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 CSF2RBP32927 897 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 SSR1P43307 286 aaKnown RBP15.91■□□□□ 0.14
CKS1B-202ENST00000368436 EPHB1P54762 984 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 RPL26P61254 145 aaKnown RBP15.91■□□□□ 0.14
CKS1B-202ENST00000368436 GPLD1P80108 840 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 NIPAL4Q0D2K0 466 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 LRP8Q14114 963 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 PDK2Q15119 407 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 TMEM71Q6P5X7 295 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 MARK2Q7KZI7 788 aaKnown RBP15.91■□□□□ 0.14
CKS1B-202ENST00000368436 CPNE8Q86YQ8 564 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 GALNT13Q8IUC8 556 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 AGBL5Q8NDL9 886 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 NKD1Q969G9 470 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 FAF2Q96CS3 445 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 IQCDQ96DY2 449 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 WDR24Q96S15 920 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 DDA1Q9BW61 102 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 CBX8Q9HC52 389 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 STARD5Q9NSY2 213 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 HAUS2Q9NVX0 235 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 KCNK4Q9NYG8 393 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 VPS18Q9P253 973 aa15.91■□□□□ 0.14
CKS1B-202ENST00000368436 CNOT6Q9ULM6 557 aaKnown RBP15.91■□□□□ 0.14
CKS1B-202ENST00000368436 RPL26L1Q9UNX3 145 aaKnown RBP15.91■□□□□ 0.14
CKS1B-202ENST00000368436 PCYT1BQ9Y5K3 369 aaPredicted RBP15.91■□□□□ 0.14
CKS1B-202ENST00000368436 SLC28A2O43868 658 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 DNAJC6O75061 913 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 PROSCO94903 275 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 MAP3K6O95382 1288 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 CLDN7O95471 211 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 EML2O95834 649 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 HLA-DQB2P05538 268 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 CA4P22748 312 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 UBASH3AP57075 661 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 NFKBIBQ15653 356 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 TBR1Q16650 682 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.9■□□□□ 0.14
CKS1B-202ENST00000368436 SFRP1Q8N474 314 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 PQLC3Q8N755 202 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 KCTD6Q8NC69 237 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 ZNF564Q8TBZ8 553 aaPredicted RBP15.9■□□□□ 0.14
CKS1B-202ENST00000368436 SLC37A2Q8TED4 501 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 CPLX3Q8WVH0 158 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 HTR3CQ8WXA8 447 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 PMEPA1Q969W9 287 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 ARHGAP9Q9BRR9 750 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 PCDH9Q9HC56 1237 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 TMEM9Q9P0T7 183 aa15.9■□□□□ 0.14
CKS1B-202ENST00000368436 OAS3Q9Y6K5 1087 aaKnown RBP15.9■□□□□ 0.14
CKS1B-202ENST00000368436 MYO18BQ8IUG5 2567 aa15.89■□□□□ 0.13
CKS1B-202ENST00000368436 B4E171 279 aa15.89■□□□□ 0.13
CKS1B-202ENST00000368436 INPP4BO15327 924 aa15.89■□□□□ 0.13
CKS1B-202ENST00000368436 SFTPCP11686 197 aa15.89■□□□□ 0.13
CKS1B-202ENST00000368436 MPSTP25325 297 aa15.89■□□□□ 0.13
CKS1B-202ENST00000368436 CSTF2P33240 577 aaKnown RBP eCLIP15.89■□□□□ 0.13
CKS1B-202ENST00000368436 TSPAN7P41732 249 aa15.89■□□□□ 0.13
CKS1B-202ENST00000368436 SPINT3P49223 89 aa15.89■□□□□ 0.13
CKS1B-202ENST00000368436 TAS2R40P59535 323 aa15.89■□□□□ 0.13
CKS1B-202ENST00000368436 CYP4F2P78329 520 aa15.89■□□□□ 0.13
CKS1B-202ENST00000368436 GBE1Q04446 702 aa15.89■□□□□ 0.13
CKS1B-202ENST00000368436 SLC10A2Q12908 348 aaPredicted RBP15.89■□□□□ 0.13
CKS1B-202ENST00000368436 NFATC3Q12968 1075 aa15.89■□□□□ 0.13
CKS1B-202ENST00000368436 LUZP1Q86V48 1076 aa15.89■□□□□ 0.13
CKS1B-202ENST00000368436 MAP7D3Q8IWC1 876 aa15.89■□□□□ 0.13
CKS1B-202ENST00000368436 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.89■□□□□ 0.13
CKS1B-202ENST00000368436 CCDC112Q8NEF3 446 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms