RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 TTC1Q99614 292 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 TCF25Q9BQ70 676 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 EMILIN2Q9BXX0 1053 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 LMAN2LQ9H0V9 348 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 NKX2-4Q9H2Z4 354 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 GSTO2Q9H4Y5 243 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 YY1AP1Q9H869 796 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 CYP4F12Q9HCS2 524 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 NMRK1Q9NWW6 199 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 LRCH1Q9Y2L9 728 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 PKP3Q9Y446 797 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 TRAF6Q9Y4K3 522 aa13.97□□□□□ -0.17
USF1-202ENST00000368020 UBA6A0AVT1 1052 aaPredicted RBP13.96□□□□□ -0.17
USF1-202ENST00000368020 NEMP2A6NFY4 417 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 CCL22O00626 93 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 UBDO15205 165 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 TEX28O15482 410 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 VPS4BO75351 444 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 GJB3O75712 270 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 ZMPSTE24O75844 475 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 SUPT7LO94864 414 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 PRLP01236 227 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 ADH1AP07327 375 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 HNRNPLP14866 589 aaKnown RBP eCLIP13.96□□□□□ -0.17
USF1-202ENST00000368020 CCR10P46092 362 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 RGRP47804 291 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 CLNS1AP54105 237 aaKnown RBP13.96□□□□□ -0.17
USF1-202ENST00000368020 EPHB1P54762 984 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 RHOAP61586 193 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 GPM6BQ13491 265 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 ART3Q13508 389 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 CAMK1Q14012 370 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 LRIT3Q3SXY7 679 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 TXNDC11Q6PKC3 985 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 TMEM207Q6UWW9 146 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 CHRDL2Q6WN34 429 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 CERS6Q6ZMG9 384 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 Q6ZNB5 142 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 EFL1Q7Z2Z2 1120 aaKnown RBP13.96□□□□□ -0.17
USF1-202ENST00000368020 PIM3Q86V86 326 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 HOMEZQ8IX15 550 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 CLYBLQ8N0X4 340 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 CPXM2Q8N436 756 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 CARNMT1Q8N4J0 409 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 PHF21BQ96EK2 531 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 ZFRQ96KR1 1074 aaKnown RBP13.96□□□□□ -0.17
USF1-202ENST00000368020 CATSPER2Q96P56 530 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 FEM1AQ9BSK4 669 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 MAGEE1Q9HCI5 957 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 S100A14Q9HCY8 104 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 SPO11Q9Y5K1 396 aa13.96□□□□□ -0.17
USF1-202ENST00000368020 COPG1Q9Y678 874 aaKnown RBP13.96□□□□□ -0.17
USF1-202ENST00000368020 OAS3Q9Y6K5 1087 aaKnown RBP13.96□□□□□ -0.17
USF1-202ENST00000368020 CHD7Q9P2D1 2997 aa13.96□□□□□ -0.18
USF1-202ENST00000368020 GFRA2O00451 464 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 GRM6O15303 877 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 TSPAN3O60637 253 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 GPC4O75487 556 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 ESR1P03372 595 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 CNPP09543 421 aaKnown RBP13.95□□□□□ -0.18
USF1-202ENST00000368020 KCNA5P22460 613 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 PTGER3P43115 390 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 CSNK1DP48730 415 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 SGSHP51688 502 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 XIAPP98170 497 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 RTL10Q7L3V2 364 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 SPRED2Q7Z698 418 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 DSELQ8IZU8 1212 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 MDGA1Q8NFP4 955 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 MRPS31Q92665 395 aaKnown RBP13.95□□□□□ -0.18
USF1-202ENST00000368020 TIFAQ96CG3 184 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 ATOH8Q96SQ7 321 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 ZNF184Q99676 751 aaPredicted RBP13.95□□□□□ -0.18
USF1-202ENST00000368020 MRPL1Q9BYD6 325 aaKnown RBP13.95□□□□□ -0.18
USF1-202ENST00000368020 SHCBP1LQ9BZQ2 653 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 UNKQ9C0B0 810 aaKnown RBP13.95□□□□□ -0.18
USF1-202ENST00000368020 LHX3Q9UBR4 397 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 POMPQ9Y244 141 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 PCDHB1Q9Y5F3 818 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 STX16-NPEPL1H3BU86 382 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 STX16O14662 325 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 AIM2O14862 343 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 PIRTP0C851 137 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 GFAPP14136 432 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 PKMP14618 531 aaKnown RBP13.95□□□□□ -0.18
USF1-202ENST00000368020 HDCP19113 662 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 ACADVLP49748 655 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 STX1BP61266 288 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 SEMA3AQ14563 771 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 ZFP1Q6P2D0 407 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 LILRA6Q6PI73 481 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 CCDC149Q6ZUS6 474 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 DTX3LQ8TDB6 740 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 AUTS2Q8WXX7 1259 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 DLG3Q92796 817 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 KCNJ9Q92806 393 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 PTERQ96BW5 349 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 EXOC2Q96KP1 924 aa13.95□□□□□ -0.18
USF1-202ENST00000368020 ZNF106Q9H2Y7 1883 aaKnown RBP13.95□□□□□ -0.18
USF1-202ENST00000368020 POLR3BQ9NW08 1133 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms