RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 NR1D2Q14995 579 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 TMEM44Q2T9K0 475 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 C16orf62Q7Z3J2 963 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 NATD1Q8N6N6 113 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 FBXO30Q8TB52 745 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 CXorf40AQ8TE69 158 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 RWDD3Q9Y3V2 267 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 FADS3Q9Y5Q0 445 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 COL2A1P02458 1487 aaPredicted RBP12□□□□□ -0.49
CDC42BPA-203ENST00000366766 PQBP1O60828 265 aaKnown RBP12□□□□□ -0.49
CDC42BPA-203ENST00000366766 PTGER3P43115 390 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 TEX47Q8TBZ9 253 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 DGCR6LQ9BY27 220 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 BRD9Q9H8M2 597 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 EXD2Q9NVH0 621 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 IL10RBQ08334 325 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 FSTL4Q6MZW2 842 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 KLHL35Q6PF15 583 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 BRSK1Q8TDC3 778 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 LRTM1Q9HBL6 345 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 THUMPD1Q9NXG2 353 aaKnown RBP12□□□□□ -0.49
CDC42BPA-203ENST00000366766 SSR3Q9UNL2 185 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 LOC100506127A0A0U1RQW1 187 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 HAT1O14929 419 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 FEN1P39748 380 aaKnown RBP12□□□□□ -0.49
CDC42BPA-203ENST00000366766 RAP1GAP2Q684P5 730 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 OR52K2Q8NGK3 314 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 YTHDF1Q9BYJ9 559 aaKnown RBP12□□□□□ -0.49
CDC42BPA-203ENST00000366766 LDOC1O95751 146 aaPredicted RBP12□□□□□ -0.49
CDC42BPA-203ENST00000366766 PKMP14618 531 aaKnown RBP12□□□□□ -0.49
CDC42BPA-203ENST00000366766 CTBP1Q13363 440 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 GORASP1Q9BQQ3 440 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 PLK2Q9NYY3 685 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12□□□□□ -0.49
CDC42BPA-203ENST00000366766 MFSD4BQ5TF39 518 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZC3H3Q8IXZ2 948 aaKnown RBP12□□□□□ -0.49
CDC42BPA-203ENST00000366766 CHCHD4Q8N4Q1 142 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 REXO5Q96IC2 774 aaKnown RBP12□□□□□ -0.49
CDC42BPA-203ENST00000366766 C1orf21Q9H246 121 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 DENND2DQ9H6A0 471 aaPredicted RBP12□□□□□ -0.49
CDC42BPA-203ENST00000366766 SMURF2Q9HAU4 748 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 EHD3Q9NZN3 535 aa12□□□□□ -0.49
CDC42BPA-203ENST00000366766 PRKAR1AP10644 381 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 C10orf62Q5T681 223 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 HECTD2Q5U5R9 776 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 THAP5Q7Z6K1 395 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 CMASQ8NFW8 434 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 KCTD15Q96SI1 283 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 CLDN9O95484 217 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 HIST1H2ABP04908 130 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZNF12P17014 697 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 TAL1P17542 331 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 BMP7P18075 431 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 HIST3H2AQ7L7L0 130 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 PEX5LQ8IYB4 626 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 RAB2BQ8WUD1 216 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 HIST1H2ACQ93077 130 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 MRPL45Q9BRJ2 306 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 CDH3P22223 829 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 APTXQ7Z2E3 356 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 ALG2Q9H553 416 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 SMPD4Q9NXE4 827 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 LAMB1P07942 1786 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 MFSD11O43934 449 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZNF24P17028 368 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 LILRA4P59901 499 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 EEF1DP3Q658K8 133 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 DENND1CQ8IV53 801 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 CCDC185Q8N715 623 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 PRICKLE1Q96MT3 831 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 AGAP2Q99490 1192 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 TBCDQ9BTW9 1192 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 IRAK3Q9Y616 596 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 IFNGP01579 166 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 HNRNPLP14866 589 aaKnown RBP eCLIP11.99□□□□□ -0.496e-7■■■■□ 24.4
CDC42BPA-203ENST00000366766 FGFR3P22607 806 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 CDH4P55283 916 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 KLHL17Q6TDP4 642 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 RBM44Q6ZP01 1051 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 KCTD13Q8WZ19 329 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 VPS35Q96QK1 796 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZDHHC18Q9NUE0 388 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 STON1Q9Y6Q2 735 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 PTPRJQ12913 1337 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 E9PAM4 449 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 GRM6O15303 877 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 PEX11AO75192 247 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 DUSP11O75319 330 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 EOMESO95936 686 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 CHRNB2P17787 502 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 PSMD4P55036 377 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 MPPE1Q53F39 396 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 PEG10Q86TG7 708 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 RTL3Q8N8U3 475 aaKnown RBP11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 FAM81AQ8TBF8 368 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 AGPSO00116 658 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 C8GP07360 202 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 MC4RP32245 332 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 USP4Q13107 963 aa11.99□□□□□ -0.49
CDC42BPA-203ENST00000366766 TIGD2Q4W5G0 525 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms