RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 ZNF563Q8TA94 476 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 CSGALNACT1Q8TDX6 532 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 PIGKQ92643 395 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 UROC1Q96N76 676 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 TNFSF13BQ9Y275 285 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 BACE1P56817 501 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 FAM171A1Q5VUB5 890 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 OR8H3Q8N146 312 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 MPP5Q8N3R9 675 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 MKL1Q969V6 931 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 TMEM39BQ9GZU3 492 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 DNAJC11Q9NVH1 559 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 CALML5Q9NZT1 146 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 RCOR3Q9P2K3 495 aaPredicted RBP16.7■□□□□ 0.26
NID1-202ENST00000366595 CDH22Q9UJ99 828 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 PRELID1Q9Y255 219 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 OR2AT4A6NND4 320 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 LACTBL1A8MY62 500 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 CRHR1P34998 444 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 PLEKHG4Q58EX7 1191 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 DCST1Q5T197 706 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 LPCAT4Q643R3 524 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 CXorf57Q6NSI4 855 aaKnown RBP16.7■□□□□ 0.26
NID1-202ENST00000366595 PARP8Q8N3A8 854 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 OR2L5Q8NG80 312 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 SLC22A4Q9H015 551 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 TMEM134Q9H6X4 195 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 SMPD4Q9NXE4 827 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 RBMX2Q9Y388 322 aaKnown RBP16.7■□□□□ 0.26
NID1-202ENST00000366595 ABCA8O94911 1581 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 H0YJX3 145 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 CD2P06729 351 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 ALDH4A1P30038 563 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 PFKPQ01813 784 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 ACVR2BQ13705 512 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 CPSF6Q16630 551 aaKnown RBP eCLIP16.7■□□□□ 0.26
NID1-202ENST00000366595 ANKRD26P1Q6NSI1 321 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 SRFBP1Q8NEF9 429 aaKnown RBP16.7■□□□□ 0.26
NID1-202ENST00000366595 IPCEF1Q8WWN9 437 aaPredicted RBP16.7■□□□□ 0.26
NID1-202ENST00000366595 DGKBQ9Y6T7 804 aa16.7■□□□□ 0.26
NID1-202ENST00000366595 SLC35G4P0C7Q5 338 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 POLR2JP52435 117 aaKnown RBP16.69■□□□□ 0.26
NID1-202ENST00000366595 BEND7Q8N7W2 519 aaPredicted RBP16.69■□□□□ 0.26
NID1-202ENST00000366595 ADAM32Q8TC27 787 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 CNPPD1Q9BV87 410 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 XKR8Q9H6D3 395 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 ARL8BQ9NVJ2 186 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 PDE10AQ9Y233 779 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 FAM205AQ6ZU69 1335 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 USP17L7P0C7H9 530 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 CHKAP35790 457 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 USF2Q15853 346 aaPredicted RBP16.69■□□□□ 0.26
NID1-202ENST00000366595 C4orf46Q504U0 113 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 ANO7Q6IWH7 933 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 CLNKQ7Z7G1 428 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 PHF13Q86YI8 300 aaPredicted RBP16.69■□□□□ 0.26
NID1-202ENST00000366595 DENND6BQ8NEG7 585 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 OR4L1Q8NH43 312 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 TAMM41Q96BW9 452 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 LINGO1Q96FE5 620 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 C5orf34Q96MH7 638 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 SCGB3A2Q96PL1 93 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 CIB1Q99828 191 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 OMDQ99983 421 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 FSCN2O14926 492 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 CYB5AP00167 134 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 LAMP2P13473 410 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 INSRRP14616 1297 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 ABCG1P45844 678 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 RNASE12Q5GAN4 147 aaKnown RBP16.69■□□□□ 0.26
NID1-202ENST00000366595 NPAS2Q99743 824 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 TRIM17Q9Y577 477 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 SAGP10523 405 aaPredicted RBP16.69■□□□□ 0.26
NID1-202ENST00000366595 MAGP20916 626 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 KCNA5P22460 613 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 KLRC2P26717 231 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 ATXN1P54253 815 aaKnown RBP16.69■□□□□ 0.26
NID1-202ENST00000366595 PDCD4Q53EL6 469 aaKnown RBP16.69■□□□□ 0.26
NID1-202ENST00000366595 KLHL22Q53GT1 634 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 RAET1GQ6H3X3 334 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 PAMR1Q6UXH9 720 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 INO80EQ8NBZ0 244 aaPredicted RBP16.69■□□□□ 0.26
NID1-202ENST00000366595 ROPN1LQ96C74 230 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 KLHL5Q96PQ7 755 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 COPS8Q99627 209 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 GRHL1Q9NZI5 618 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 DNMT3LQ9UJW3 386 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 WDR37Q9Y2I8 494 aa16.69■□□□□ 0.26
NID1-202ENST00000366595 FABP12A6NFH5 140 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 CLPXO76031 633 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 HTR1BP28222 390 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 MARSP56192 900 aaKnown RBP16.68■□□□□ 0.26
NID1-202ENST00000366595 CAPN13Q6MZZ7 669 aaPredicted RBP16.68■□□□□ 0.26
NID1-202ENST00000366595 KLHL35Q6PF15 583 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 FBXO16Q8IX29 292 aaPredicted RBP16.68■□□□□ 0.26
NID1-202ENST00000366595 PRELID2Q8N945 189 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 LRRN4CLQ8ND94 238 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 OR2L3Q8NG85 312 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 CEP76Q8TAP6 659 aa16.68■□□□□ 0.26
NID1-202ENST00000366595 PIGXQ8TBF5 258 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms