RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 PLD6Q8N2A8 252 aaKnown RBP16.29■□□□□ 0.2
SCAF1-201ENST00000360565 CBR4Q8N4T8 237 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 BRSK1Q8TDC3 778 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 OSBPL2Q9H1P3 480 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 ZFYVE1Q9HBF4 777 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 TRIM17Q9Y577 477 aa16.29■□□□□ 0.2
SCAF1-201ENST00000360565 STX16-NPEPL1H3BU86 382 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 SNAI1O95863 264 aaPredicted RBP16.28■□□□□ 0.2
SCAF1-201ENST00000360565 F2P00734 622 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 CYP2A6P11509 494 aaPredicted RBP16.28■□□□□ 0.2
SCAF1-201ENST00000360565 ALDH6A1Q02252 535 aaKnown RBP16.28■□□□□ 0.2
SCAF1-201ENST00000360565 IL10RBQ08334 325 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 DPYSQ14117 519 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 MAPK11Q15759 364 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 ERLEC1Q96DZ1 483 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 DUSP12Q9UNI6 340 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 U3KQV3 271 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 SLC25A14O95258 325 aaPredicted RBP16.28■□□□□ 0.2
SCAF1-201ENST00000360565 POLR2JP52435 117 aaKnown RBP16.28■□□□□ 0.2
SCAF1-201ENST00000360565 TP53BP2Q13625 1128 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 ZNF792Q3KQV3 632 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 AADATQ8N5Z0 425 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 MAB21L3Q8N8X9 362 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 OR13C4Q8NGS5 318 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 SKA1Q96BD8 255 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 ZCCHC2Q9C0B9 1178 aaKnown RBP16.28■□□□□ 0.2
SCAF1-201ENST00000360565 CRTAC1Q9NQ79 661 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 TRMT13Q9NUP7 481 aaKnown RBP16.28■□□□□ 0.2
SCAF1-201ENST00000360565 ZDHHC2Q9UIJ5 367 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 TDRKHQ9Y2W6 561 aaKnown RBP16.28■□□□□ 0.2
SCAF1-201ENST00000360565 SIX3O95343 332 aaPredicted RBP16.28■□□□□ 0.2
SCAF1-201ENST00000360565 TRIP4Q15650 581 aaPredicted RBP16.28■□□□□ 0.2
SCAF1-201ENST00000360565 SETMARQ53H47 684 aaPredicted RBP16.28■□□□□ 0.2
SCAF1-201ENST00000360565 BROXQ5VW32 411 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 ANO7Q6IWH7 933 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 SPATA19Q7Z5L4 167 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 CCDC103Q8IW40 242 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 CPNE9Q8IYJ1 553 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 PGBD3Q8N328 593 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 PCDH12Q9NPG4 1184 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 EVLQ9UI08 416 aaPredicted RBP16.28■□□□□ 0.2
SCAF1-201ENST00000360565 RAB26Q9ULW5 256 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 PIRO00625 290 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 ALDOAP04075 364 aaKnown RBP16.28■□□□□ 0.2
SCAF1-201ENST00000360565 LIPEQ05469 1076 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 CCDC142Q17RM4 750 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 IL23RQ5VWK5 629 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 SVOPQ8N4V2 548 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 SLC7A6OSQ96CW6 309 aaPredicted RBP16.28■□□□□ 0.2
SCAF1-201ENST00000360565 MYO19Q96H55 970 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 GPR22Q99680 433 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 CORO1BQ9BR76 489 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 MAGEH1Q9H213 219 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 AHSPQ9NZD4 102 aa16.28■□□□□ 0.2
SCAF1-201ENST00000360565 CCDC162PA2VCL2 907 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 SLC28A1O00337 649 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 IFRD1O00458 451 aaPredicted RBP16.27■□□□□ 0.2
SCAF1-201ENST00000360565 PCDH8O95206 1070 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 SPATA31D3P0C874 917 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 FUT10Q6P4F1 479 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 SPATA31D4Q6ZUB0 917 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 PANX1Q96RD7 426 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 FKBPLQ9UIM3 349 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 MYO5AQ9Y4I1 1855 aaKnown RBP16.27■□□□□ 0.2
SCAF1-201ENST00000360565 TJP1Q07157 1748 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.27■□□□□ 0.2
SCAF1-201ENST00000360565 CCDC189A1A4V9 331 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 FAM72CH0Y354 149 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 OR4F21O95013 312 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 POLR2EP19388 210 aaKnown RBP16.27■□□□□ 0.2
SCAF1-201ENST00000360565 CXCR3P49682 368 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 MLLT6P55198 1093 aaPredicted RBP16.27■□□□□ 0.2
SCAF1-201ENST00000360565 GALNT2Q10471 571 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 FAM72AQ5TYM5 149 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 FAM72DQ6L9T8 149 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 FAM72BQ86X60 149 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 PHACTR4Q8IZ21 702 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 IPPKQ9H8X2 491 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 CAPN10Q9HC96 672 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 ARL5AQ9Y689 179 aa16.27■□□□□ 0.2
SCAF1-201ENST00000360565 ZFP37Q9Y6Q3 630 aaPredicted RBP16.27■□□□□ 0.2
SCAF1-201ENST00000360565 RFXANKO14593 260 aa16.27■□□□□ 0.19
SCAF1-201ENST00000360565 SEPT4O43236 478 aa16.27■□□□□ 0.19
SCAF1-201ENST00000360565 RFX3P48380 749 aa16.27■□□□□ 0.19
SCAF1-201ENST00000360565 HSPA7P48741 367 aa16.27■□□□□ 0.19
SCAF1-201ENST00000360565 ST13P50502 369 aaKnown RBP16.27■□□□□ 0.19
SCAF1-201ENST00000360565 SLC16A1P53985 500 aa16.27■□□□□ 0.19
SCAF1-201ENST00000360565 RBM20Q5T481 1227 aaKnown RBP16.27■□□□□ 0.19
SCAF1-201ENST00000360565 GPR156Q8NFN8 814 aa16.27■□□□□ 0.19
SCAF1-201ENST00000360565 GTF2IRD1Q9UHL9 959 aa16.27■□□□□ 0.19
SCAF1-201ENST00000360565 ARIH1Q9Y4X5 557 aaPredicted RBP16.27■□□□□ 0.19
SCAF1-201ENST00000360565 INSIG1O15503 277 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 GABRR2P28476 465 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 CRATP43155 626 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 LSM3P62310 102 aaKnown RBP16.26■□□□□ 0.19
SCAF1-201ENST00000360565 SMARCB1Q12824 385 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 ABRQ12979 859 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 ADGRE1Q14246 886 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 FGD3Q5JSP0 725 aa16.26■□□□□ 0.19
SCAF1-201ENST00000360565 ZCCHC8Q6NZY4 707 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms