RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 AHSA2Q719I0 299 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 METTL21AQ8WXB1 218 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 CLPTM1LQ96KA5 538 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 UGT1A7Q9HAW7 530 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 UGT1A10Q9HAW8 530 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 UGT1A8Q9HAW9 530 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 TREM1Q9NP99 234 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 KCNE2Q9Y6J6 123 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 COLEC10Q9Y6Z7 277 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 UGT2B17O75795 530 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 ANGPTL1O95841 491 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 PPM1AP35813 382 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 NCCRP1Q6ZVX7 275 aaPredicted RBP13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 BEND5Q7L4P6 421 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 ATP13A1Q9HD20 1204 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 TBC1D3BA6NDS4 549 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 SUV39H1O43463 412 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 TSPAN3O60637 253 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 TM7SF2O76062 418 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 PTX3P26022 381 aaPredicted RBP13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 CHSY3Q70JA7 882 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 JAZF1Q86VZ6 243 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 ZNF433Q8N7K0 673 aaPredicted RBP13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 TP53INP1Q96A56 240 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 MECRQ9BV79 373 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 SLC22A4Q9H015 551 aa13.18□□□□□ -0.3
SRGAP3-201ENST00000360413 FDPSP14324 419 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 WEE1P30291 646 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 MAN2A2P49641 1150 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 AFF1P51825 1210 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 TKTL1P51854 596 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 SLC25A25Q6KCM7 469 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 USP43Q70EL4 1123 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 OR2T34Q8NGX1 318 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 OR2T3Q8NH03 318 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 ZNF563Q8TA94 476 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 DCAKDQ8WVC6 231 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 TRIM43Q96BQ3 446 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 MAGEL2Q9UJ55 1249 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 PCDHGB1Q9Y5G3 927 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 KCNA5P22460 613 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 ASMTP46597 345 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 CENPSQ8N2Z9 138 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 RDH11Q8TC12 318 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 NODALQ96S42 347 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 RSPH9Q9H1X1 276 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 KCND1Q9NSA2 647 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 COPS7AQ9UBW8 275 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 TMEM5Q9Y2B1 443 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 RAP2CQ9Y3L5 183 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 FABP12A6NFH5 140 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 LTA4HP09960 611 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 PIK3CBP42338 1070 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 MXD1Q05195 221 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 CYP4X1Q8N118 509 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 IL1RAPQ9NPH3 570 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 ELOVL2Q9NXB9 296 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 RDH8Q9NYR8 311 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 WASHC1A8K0Z3 465 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 WASH3PC4AMC7 463 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 KPNA3O00505 521 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 PRMT5O14744 637 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 ALDH4A1P30038 563 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 TIE1P35590 1138 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 PRKAG1P54619 331 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 ELP6Q0PNE2 266 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 WASH2PQ6VEQ5 465 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 RD3Q7Z3Z2 195 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 ARMC10Q8N2F6 343 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 UBXN7O94888 489 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 OTCP00480 354 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 HAGHLQ6PII5 290 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 COL26A1Q96A83 441 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 C12orf43Q96C57 262 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 PRICKLE1Q96MT3 831 aaPredicted RBP13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 ASB7Q9H672 318 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 CISHQ9NSE2 258 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 HDAC3O15379 428 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 ABHD2P08910 425 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 HGFP14210 728 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 DCDC1P59894 354 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 TRIM28Q13263 835 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 KLHDC10Q6PID8 442 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 ADGRG6Q86SQ4 1221 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 CMTR2Q8IYT2 770 aaKnown RBP13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 ACMSDQ8TDX5 336 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 TIFAQ96CG3 184 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 DNMT3LQ9UJW3 386 aa13.17□□□□□ -0.3
SRGAP3-201ENST00000360413 A0A1W2PQ67 120 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 ISPDA4D126 451 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 SH3D21A4FU49 640 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 STMND1H3BQB6 276 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 AQP4P55087 323 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 ZNF268Q14587 947 aaPredicted RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 LARS2Q15031 903 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 ANGEL2Q5VTE6 544 aaKnown RBP13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 PCYOX1Q9UHG3 505 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 FAM86B1E9PN63 330 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 FSHRP23945 695 aa13.16□□□□□ -0.3
SRGAP3-201ENST00000360413 PTPN11Q06124 597 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms