RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 PRLRP16471 622 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 IGFN1Q86VF2 1251 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 OR52E6Q96RD3 313 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.33□□□□□ -1.24
VPS13A-202ENST00000357409 SLITRK2Q9H156 845 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 NKX2-4Q9H2Z4 354 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 C11orf49Q9H6J7 331 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 AGO3Q9H9G7 860 aaKnown RBP7.33□□□□□ -1.24
VPS13A-202ENST00000357409 hCG_2039718K7EN88 272 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 CLOCKO15516 846 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 ATG14Q6ZNE5 492 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 ZDHHC13Q8IUH4 622 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 SH3YL1Q96HL8 342 aaPredicted RBP7.33□□□□□ -1.24
VPS13A-202ENST00000357409 ERGIC2Q96RQ1 377 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 CPXM1Q96SM3 734 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 ZCCHC2Q9C0B9 1178 aaKnown RBP7.33□□□□□ -1.24
VPS13A-202ENST00000357409 CDH7Q9ULB5 785 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 MORC2Q9Y6X9 1032 aaPredicted RBP7.33□□□□□ -1.24
VPS13A-202ENST00000357409 ZNF536O15090 1300 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 SH3PXD2BA1X283 911 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 AKAP8O43823 692 aaKnown RBP7.33□□□□□ -1.24
VPS13A-202ENST00000357409 IL33O95760 270 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 JMJD7P0C870 316 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 TRIM16LQ309B1 348 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 MTX3Q5HYI7 312 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 BSNDQ8WZ55 320 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 CCDC120Q96HB5 630 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 AGAP2Q99490 1192 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 ADAM7Q9H2U9 754 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 ASB7Q9H672 318 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 ABCB10Q9NRK6 738 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 ZNF358Q9NW07 568 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 EHD3Q9NZN3 535 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 DIRAS1O95057 198 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 C22orf31O95567 290 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 ITGB3BPQ13352 177 aaPredicted RBP7.33□□□□□ -1.24
VPS13A-202ENST00000357409 ADGRE1Q14246 886 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 PLEKHG6Q3KR16 790 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 FRRS1Q6ZNA5 592 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 PHYKPLQ8IUZ5 450 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 COPS8Q99627 209 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 BRF2Q9HAW0 419 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 IKZF3Q9UKT9 509 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 ACTL7AQ9Y615 435 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 CPS1P31327 1500 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 TFECO14948 347 aaPredicted RBP7.33□□□□□ -1.24
VPS13A-202ENST00000357409 GIMD1P0DJR0 217 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 FSHRP23945 695 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 PIK3R1P27986 724 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 NMBRP28336 390 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 GBE1Q04446 702 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 SRYQ05066 204 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 PUM1Q14671 1186 aaKnown RBP eCLIP7.33□□□□□ -1.24
VPS13A-202ENST00000357409 CYB5D1Q6P9G0 228 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 KCND2Q9NZV8 630 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 MED31Q9Y3C7 131 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 SALL1Q9NSC2 1324 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 E9PAM4 449 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 RAD23AP54725 363 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 WNT3AP56704 352 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 MPP1Q00013 466 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 NDUFAF6Q330K2 333 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 CRY2Q49AN0 593 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 TIGD5Q53EQ6 642 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 PCID2Q5JVF3 399 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 HFE2Q6ZVN8 426 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 STK40Q8N2I9 435 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 MSLNLQ96KJ4 702 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 PPM1MQ96MI6 270 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 GPR21Q99679 349 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 GNPTGQ9UJJ9 305 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 CYP8B1Q9UNU6 501 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 PLAGL2Q9UPG8 496 aa7.33□□□□□ -1.24
VPS13A-202ENST00000357409 AK9Q5TCS8 1911 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 C9P02748 559 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ATP5F1P24539 256 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 TM4SF1P30408 202 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 VHLP40337 213 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 RPIAP49247 311 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 CDK18Q07002 472 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 GNA13Q14344 377 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 NT5DC1Q5TFE4 455 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 GPR107Q5VW38 600 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 CPNE9Q8IYJ1 553 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 CRYBG2Q8N1P7 616 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 OXR1Q8N573 874 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 OR10H5Q8NGA6 315 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ZNF296Q8WUU4 475 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 TSACCQ96A04 125 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 CCDC126Q96EE4 140 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 J3KR12 359 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 ZNF16P17020 682 aaPredicted RBP7.32□□□□□ -1.24
VPS13A-202ENST00000357409 MAOBP27338 520 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 AVPR1BP47901 424 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 MLLT10P55197 1068 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 FKBP1BP68106 108 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 PDGFRLQ15198 375 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 HKDC1Q2TB90 917 aa7.32□□□□□ -1.24
VPS13A-202ENST00000357409 TMEM31Q5JXX7 168 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms