RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 CUZD1Q86UP6 607 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CIDECQ96AQ7 238 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 GSDMCQ9BYG8 508 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 FBXO6Q9NRD1 293 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 PLOD2O00469 737 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 METTL18O95568 372 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 JCHAINP01591 159 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 RAP2AP10114 183 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 FBXW4P57775 412 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ZACNQ401N2 412 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 TIFABQ6ZNK6 161 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 C1orf186Q6ZWK4 172 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 NXNL1Q96CM4 212 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 MFSD14AQ96MC6 490 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 SNCAIPQ9Y6H5 919 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 GJA3Q9Y6H8 435 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ACSL1P33121 698 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 STYK1Q6J9G0 422 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 METTL2BQ6P1Q9 378 aaKnown RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 S100A13Q99584 98 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CGREF1Q99674 301 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 MYNNQ9NPC7 610 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 DLGAP1O14490 977 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 HGFP14210 728 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 DARSP14868 501 aaKnown RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 SSTR1P30872 391 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 RNASEH2BQ5TBB1 312 aaKnown RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ARMC8Q8IUR7 673 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 HDAC2Q92769 488 aaKnown RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CEP295NLQ96MC4 621 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ZNRF3Q9ULT6 936 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 SH3BP1Q9Y3L3 701 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 NFASCO94856 1347 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 H3BNH8 94 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 SLC5A3P53794 718 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CTBP2P56545 445 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 VMACQ2NL98 169 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 HACD4Q5VWC8 232 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ATG14Q6ZNE5 492 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 NOP9Q86U38 636 aaKnown RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 SERAC1Q96JX3 654 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 OR52E6Q96RD3 313 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 HERC2P3Q9BVR0 1158 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 LMAN2LQ9H0V9 348 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ACTR3BQ9P1U1 418 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CAPN8A6NHC0 703 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 SGPL1O95470 568 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 GNRH1P01148 92 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 JAM2P57087 298 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 RHAGQ02094 409 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 EIPR1Q53HC9 387 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 C10orf120Q5SQS8 335 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 GRHL2Q6ISB3 625 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 LAYNQ6UX15 382 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ILDR2Q71H61 639 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 NECAB2Q7Z6G3 386 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 GPR180Q86V85 440 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 AVL9Q8NBF6 648 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 SLC47A1Q96FL8 570 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 MBOAT7Q96N66 472 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 DNAJB9Q9UBS3 223 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 FNDC3AQ9Y2H6 1198 aaKnown RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 TAF6LQ9Y6J9 622 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF879B4DU55 563 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 GRID2O43424 1007 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CD2P06729 351 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 TXNP10599 105 aaKnown RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CDH1P12830 882 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CTPS1P17812 591 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 SLC18A2Q05940 514 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 NRF1Q16656 503 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ARHGAP15Q53QZ3 475 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 RINLQ6ZS11 566 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CHST15Q7LFX5 561 aaPredicted RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 COL21A1Q96P44 957 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 SLC29A3Q9BZD2 475 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 TMEM131LA2VDJ0 1609 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CLCA1A8K7I4 914 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 FREM3P0C091 2139 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 COX7A2P14406 83 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 KLK7P49862 253 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ATP4BP51164 291 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 LIMK2P53671 638 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 OVOS1Q6IE37 1185 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 RPL13AP3Q6NVV1 102 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ASCC1Q8N9N2 400 aaKnown RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 OR4A15Q8NGL6 344 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ACAT2Q9BWD1 397 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 MRM3Q9HC36 420 aaKnown RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 SRP68Q9UHB9 627 aaKnown RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 GTF2IRD1Q9UHL9 959 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CHKBQ9Y259 395 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ZNF510Q9Y2H8 683 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 KNDC1Q76NI1 1749 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 DHX15O43143 795 aaKnown RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ABCB7O75027 752 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 MATKP42679 507 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 SLC25A24Q6NUK1 477 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ZC3H7AQ8IWR0 971 aaKnown RBP6.55□□□□□ -1.36
VPS13B-202ENST00000357162 CBR4Q8N4T8 237 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms