RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 SPAM1P38567 509 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 SLC26A3P40879 764 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 MAGEA8P43361 318 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 ZNF132P52740 706 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CASP9P55211 416 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CDK16Q00536 496 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 PUDPQ08623 228 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 FUT2Q10981 343 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 PDSS1Q5T2R2 415 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 LRRC38Q5VT99 294 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CCDC80Q76M96 950 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 NAT16Q8N8M0 369 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 LCN9Q8WX39 176 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 LINGO1Q96FE5 620 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 BTN2A3PQ96KV6 586 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 GAL3ST4Q96RP7 486 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 TRIM2Q9C040 744 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 DNAJC5Q9H3Z4 198 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 NRDE2Q9H7Z3 1164 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 OSGEPQ9NPF4 335 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 B3GAT2Q9NPZ5 323 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 CNGB3Q9NQW8 809 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 SNX7Q9UNH6 387 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 GMEB1Q9Y692 573 aa5.53□□□□□ -1.52
PTPRD-202ENST00000356435 DCLK1O15075 740 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 TLR5O60602 858 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 CYP17A1P05093 508 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 SLC6A2P23975 617 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 GRM5P41594 1212 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 RAB15P59190 212 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 MAPKAPK3Q16644 382 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 ZSWIM2Q8NEG5 633 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 OMA1Q96E52 524 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 SLC38A3Q99624 504 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 BHLHE41Q9C0J9 482 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 NUAK2Q9H093 628 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 NAALADL1Q9UQQ1 740 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 NOX1Q9Y5S8 564 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 A0A087WXM4 84 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 PER2O15055 1255 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 B3GALT2O43825 422 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 IFNA6P05013 189 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 SPATA31D3P0C874 917 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 RBL1P28749 1068 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 MRPS5P82675 430 aaKnown RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 UBXN2BQ14CS0 331 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 PTPRNQ16849 979 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 HKDC1Q2TB90 917 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 PYDC2Q56P42 97 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 SPATA31D4Q6ZUB0 917 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 UBE2R2Q712K3 238 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 GPR180Q86V85 440 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 CDYL2Q8N8U2 506 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 TCP10LQ8TDR4 215 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 PRICKLE1Q96MT3 831 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 SEMA6AQ9H2E6 1030 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 SPAG4Q9NPE6 437 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 CRTAC1Q9NQ79 661 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 CCDC167Q9P0B6 97 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 RGS17Q9UGC6 210 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 NPEPPSL1A6NEC2 478 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 PRKAR1AP10644 381 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 TSHRP16473 764 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 AGXTP21549 392 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 HTR7P34969 479 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 OR1D2P34982 312 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 PLK1P53350 603 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 MANFP55145 182 aaKnown RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 ARF5P84085 180 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 GAD2Q05329 585 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 TUSC3Q13454 348 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 MAMLD1Q13495 774 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 QPRTQ15274 297 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 BROXQ5VW32 411 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 ULK3Q6PHR2 472 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 OTOP1Q7RTM1 612 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 MON1AQ86VX9 555 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 USP20Q9Y2K6 914 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 A0A0J9YVX5 310 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 RSL1D1O76021 490 aaKnown RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 UBOX5O94941 541 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 TCF4P15884 667 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 GLRA2P23416 452 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 DHPSP49366 369 aaPredicted RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 PRMT2P55345 433 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 NRG3P56975 720 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 PLGLB1Q02325 96 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 ELOAQ14241 798 aaKnown RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 NUP54Q7Z3B4 507 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 ADGRA1Q86SQ6 560 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 CADM2Q8N3J6 435 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 LRRC57Q8N9N7 239 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 SLC43A3Q8NBI5 491 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 FCRL4Q96PJ5 515 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 C1orf50Q9BV19 199 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 NOL6Q9H6R4 1146 aaKnown RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 ZFP14Q9HCL3 533 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 SSU72Q9NP77 194 aaKnown RBP5.52□□□□□ -1.53
PTPRD-202ENST00000356435 DHRS7Q9Y394 339 aa5.52□□□□□ -1.53
PTPRD-202ENST00000356435 GPC6Q9Y625 555 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms