RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 TRBV5-4A0A0C4DH59 114 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 ITM2AO43736 263 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 DCTN3O75935 186 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 RHOBTB1O94844 696 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 ITGALP20701 1170 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 PFKPQ01813 784 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 PDAP1Q13442 181 aaKnown RBP22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 RUNX3Q13761 415 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 GPR33Q49SQ1 333 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 TAS2R42Q7RTR8 314 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 TSPAN33Q86UF1 283 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 YAF2Q8IY57 180 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 GBP7Q8N8V2 638 aaPredicted RBP22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 PPP4R1Q8TF05 950 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 ANKRD49Q8WVL7 239 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 RIPOR3Q96MK2 946 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 P2RY12Q9H244 342 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 KCNK13Q9HB14 408 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 IL26Q9NPH9 171 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 ABCF3Q9NUQ8 709 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 PCDHB1Q9Y5F3 818 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 TRANK1O15050 2925 aa22.73■■□□□ 1.23
SCAMP3-202ENST00000355379 GLYATL1P3A0A0U1RQE8 302 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 PRRT4C9JH25 899 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 ESR1P03372 595 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 PYGLP06737 847 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 CYP2A6P11509 494 aaPredicted RBP22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 ARFIP2P53365 341 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 DNAJB13P59910 316 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 ARSIQ5FYB1 569 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 LRRC66Q68CR7 880 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 PIM3Q86V86 326 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 PHTF2Q8N3S3 785 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 CCDC126Q96EE4 140 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 ZNF395Q9H8N7 513 aaPredicted RBP22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 KCNK4Q9NYG8 393 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 MED16Q9Y2X0 877 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 OAS3Q9Y6K5 1087 aaKnown RBP22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 DLX3O60479 287 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 LEFTY1O75610 366 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 PRAMEF1O95521 474 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 ZNF37AP17032 561 aaPredicted RBP22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 ZNF30P17039 623 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 RPS3P23396 243 aaKnown RBP eCLIP22.72■■□□□ 1.232e-9■■■■■ 50.7
SCAMP3-202ENST00000355379 ATP5F1P24539 256 aaPredicted RBP22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 EIF2DP41214 584 aaKnown RBP22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 MTHFRP42898 656 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 NFATC2Q13469 925 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 FAM151BQ6UXP7 276 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 SPATA6LQ8N4H0 392 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 NXPE3Q969Y0 559 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 SORT1Q99523 831 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 GATA5Q9BWX5 397 aaPredicted RBP22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 PLA2G2FQ9BZM2 168 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 ASB8Q9H765 288 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 DCTN4Q9UJW0 460 aa22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 RRP15Q9Y3B9 282 aaKnown RBP22.72■■□□□ 1.23
SCAMP3-202ENST00000355379 AGAP14A8MT82 685 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 VPS26AO75436 327 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 CHRM1P11229 460 aaPredicted RBP22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 LAMP2P13473 410 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 CD1DP15813 335 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 PSMC3P17980 439 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 VIPR1P32241 457 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 PTSQ03393 145 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 CTC1Q2NKJ3 1217 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 SETMARQ53H47 684 aaPredicted RBP22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 ZNF805Q5CZA5 627 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 CTSL3PQ5NE16 218 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 NAPRTQ6XQN6 538 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 SERPINA9Q86WD7 417 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 TERB1Q8NA31 727 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 PIWIL2Q8TC59 973 aaKnown RBP22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 PLEKHG4BQ96PX9 1271 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 TMEM120AQ9BXJ8 343 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 B4GALT6Q9UBX8 382 aa22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 FNDC3AQ9Y2H6 1198 aaKnown RBP22.71■■□□□ 1.23
SCAMP3-202ENST00000355379 PLXNB3Q9ULL4 1909 aa22.7■■□□□ 1.23
SCAMP3-202ENST00000355379 GOLGA8CPA6NN73 597 aa22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 UPK3BL1B0FP48 263 aa22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 UPK3BL2E5RIL1 263 aa22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 F8W8V4 182 aa22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 PRMT5O14744 637 aaPredicted RBP22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 LYPLA1O75608 230 aaPredicted RBP22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 SNUPNO95149 360 aaKnown RBP22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 CTSLP07711 333 aa22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 TIMP2P16035 220 aa22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 ZNF7P17097 686 aaPredicted RBP22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 LHCGRP22888 699 aa22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 SP100P23497 879 aaPredicted RBP22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 OPRD1P41143 372 aa22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 SKIV2L2P42285 1042 aaKnown RBP22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 SETDB1Q15047 1291 aa22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 GALNTL6Q49A17 601 aa22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 ISCA2Q86U28 154 aa22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 WDR75Q8IWA0 830 aaKnown RBP22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 NKAPQ8N5F7 415 aaKnown RBP22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 FITM2Q8N6M3 262 aa22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 KCNJ9Q92806 393 aa22.7■■□□□ 1.22
SCAMP3-202ENST00000355379 PBXIP1Q96AQ6 731 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms