RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 MANSC1Q9H8J5 431 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 RUVBL2Q9Y230 463 aaKnown RBP20.45■□□□□ 0.86
TRIM4-202ENST00000354241 VPS9D1Q9Y2B5 631 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 ITGALP20701 1170 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 BGNP21810 368 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 MLLT1Q03111 559 aaPredicted RBP20.45■□□□□ 0.86
TRIM4-202ENST00000354241 RGS9BPQ6ZS82 235 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 TBC1D1Q86TI0 1168 aaPredicted RBP20.45■□□□□ 0.86
TRIM4-202ENST00000354241 NUDCD3Q8IVD9 361 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 CBARPQ8N350 705 aaPredicted RBP20.45■□□□□ 0.86
TRIM4-202ENST00000354241 GPR26Q8NDV2 337 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 GPAMQ9HCL2 828 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 SUN2Q9UH99 717 aa20.45■□□□□ 0.86
TRIM4-202ENST00000354241 MBTPS2O43462 519 aa20.44■□□□□ 0.86
TRIM4-202ENST00000354241 OR1I1O60431 355 aa20.44■□□□□ 0.86
TRIM4-202ENST00000354241 COL6A2P12110 1019 aa20.44■□□□□ 0.86
TRIM4-202ENST00000354241 WASP42768 502 aa20.44■□□□□ 0.86
TRIM4-202ENST00000354241 SMAD4Q13485 552 aaKnown RBP20.44■□□□□ 0.86
TRIM4-202ENST00000354241 CHRNA6Q15825 494 aa20.44■□□□□ 0.86
TRIM4-202ENST00000354241 SNX20Q7Z614 316 aa20.44■□□□□ 0.86
TRIM4-202ENST00000354241 PIM3Q86V86 326 aa20.44■□□□□ 0.86
TRIM4-202ENST00000354241 SPNS2Q8IVW8 549 aa20.44■□□□□ 0.86
TRIM4-202ENST00000354241 CENPLQ8N0S6 344 aaPredicted RBP20.44■□□□□ 0.86
TRIM4-202ENST00000354241 SPATA6LQ8N4H0 392 aa20.44■□□□□ 0.86
TRIM4-202ENST00000354241 TMIEQ8NEW7 156 aa20.44■□□□□ 0.86
TRIM4-202ENST00000354241 SCYL1Q96KG9 808 aa20.44■□□□□ 0.86
TRIM4-202ENST00000354241 FAM129BQ96TA1 746 aa20.44■□□□□ 0.86
TRIM4-202ENST00000354241 PPM1HQ9ULR3 514 aa20.44■□□□□ 0.86
TRIM4-202ENST00000354241 ERICH4A6NGS2 130 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 IL1BP01584 269 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 BPGMP07738 259 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 ZNF30P17039 623 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 FDXRP22570 491 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 METAP1P53582 386 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 SEC13P55735 322 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 DMTNQ08495 405 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 NFATC2Q13469 925 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 ERAP2Q6P179 960 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 RFLNAQ6ZTI6 216 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 PPM1EQ8WY54 764 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 NXNL1Q96CM4 212 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 UNKQ9C0B0 810 aaKnown RBP20.43■□□□□ 0.86
TRIM4-202ENST00000354241 NMRAL1Q9HBL8 299 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 PKD2L2Q9NZM6 624 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 STON1Q9Y6Q2 735 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 BIRC5O15392 142 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 RHOBTB1O94844 696 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 UGT1A6P19224 532 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 UGT1A1P22309 533 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 UGT1A4P22310 534 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 UGT1A3P35503 534 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 UGT1A5P35504 534 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 GLRBP48167 497 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 PTPN5P54829 565 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 SF3A3Q12874 501 aaKnown RBP eCLIP20.43■□□□□ 0.86
TRIM4-202ENST00000354241 DLG1Q12959 904 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 LCA5Q86VQ0 697 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 SERPINA9Q86WD7 417 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 CHPFQ8IZ52 775 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 ZNF513Q8N8E2 541 aaPredicted RBP20.43■□□□□ 0.86
TRIM4-202ENST00000354241 ZNF398Q8TD17 642 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 ARRDC3Q96B67 414 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 FAM136AQ96C01 138 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 SLCO1B3Q9NPD5 702 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 PRSS16Q9NQE7 514 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.43■□□□□ 0.86
TRIM4-202ENST00000354241 LIMD1Q9UGP4 676 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 CRLS1Q9UJA2 301 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 STARD13Q9Y3M8 1113 aa20.43■□□□□ 0.86
TRIM4-202ENST00000354241 SPECC1L-ADORA2AF8WAN1 911 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 KLHL2O95198 593 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 ITGB7P26010 798 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 CA5AP35218 305 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 PPARGP37231 505 aaPredicted RBP20.42■□□□□ 0.86
TRIM4-202ENST00000354241 PTGER3P43115 390 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 SPINT3P49223 89 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 CSHL1Q14406 222 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 PCLAFQ15004 111 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 DBN1Q16643 649 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 CERS6Q6ZMG9 384 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 DPPA4Q7L190 304 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 MMAAQ8IVH4 418 aaKnown RBP20.42■□□□□ 0.86
TRIM4-202ENST00000354241 TRIM42Q8IWZ5 723 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 SUGP1Q8IWZ8 645 aaKnown RBP20.42■□□□□ 0.86
TRIM4-202ENST00000354241 TTC1Q99614 292 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 ELAC2Q9BQ52 826 aaKnown RBP20.42■□□□□ 0.86
TRIM4-202ENST00000354241 PITPNM3Q9BZ71 974 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 CD84Q9UIB8 345 aa20.42■□□□□ 0.86
TRIM4-202ENST00000354241 SPTBN5Q9NRC6 3674 aaKnown RBP20.42■□□□□ 0.86
TRIM4-202ENST00000354241 HNRNPLP14866 589 aaKnown RBP eCLIP20.41■□□□□ 0.866e-8■■■■□ 26
TRIM4-202ENST00000354241 KCNA4P22459 653 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 ALDH3A1P30838 453 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 TIE1P35590 1138 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 TNFRSF4P43489 277 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 PDAP1Q13442 181 aaKnown RBP20.41■□□□□ 0.86
TRIM4-202ENST00000354241 CHI3L2Q15782 390 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 TSNAXIP1Q2TAA8 658 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 ZDHHC20Q5W0Z9 365 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 LRRC8EQ6NSJ5 796 aa20.41■□□□□ 0.86
TRIM4-202ENST00000354241 FBXL19Q6PCT2 694 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms