RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 CYP2U1Q7Z449 544 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 TTC30BQ8N4P2 665 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 SMG8Q8ND04 991 aaKnown RBP18.61■□□□□ 0.57
SCARF1-202ENST00000348987 ZFP42Q96MM3 310 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 SEPHS2Q99611 448 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 DUSP16Q9BY84 665 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 DCLK1O15075 740 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 STMN1P16949 149 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 TAF6P49848 677 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 ADAM17P78536 824 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 DUSP28Q4G0W2 176 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 PYCR3Q53H96 274 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 WSCD1Q658N2 575 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 CLEC20AQ6ZU45 233 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 LINC00523Q86TU6 105 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 RNF135Q8IUD6 432 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 NPLOC4Q8TAT6 608 aa18.61■□□□□ 0.57
SCARF1-202ENST00000348987 HOPXQ9BPY8 73 aaPredicted RBP18.61■□□□□ 0.57
SCARF1-202ENST00000348987 INTS10Q9NVR2 710 aaKnown RBP18.61■□□□□ 0.57
SCARF1-202ENST00000348987 YJEFN3A6XGL0 299 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 ZBTB24O43167 697 aaPredicted RBP18.6■□□□□ 0.57
SCARF1-202ENST00000348987 HUS1O60921 280 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 HSD17B1P14061 328 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 GPX3P22352 226 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 SLC6A2P23975 617 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 CRHBPP24387 322 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 ATP5F1P24539 256 aaPredicted RBP18.6■□□□□ 0.57
SCARF1-202ENST00000348987 GSTM2P28161 218 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 NOS2P35228 1153 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 STX1BP61266 288 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 BNIP2Q12982 314 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 IMPG1Q17R60 797 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 PAGE2BQ5JRK9 111 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 CYHR1Q6ZMK1 362 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 GPRIN1Q7Z2K8 1008 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 BNIPLQ7Z465 357 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 CLIP4Q8N3C7 705 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 PHF21BQ96EK2 531 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 C3orf30Q96M34 536 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 C8orf4Q9NR00 106 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 RCOR3Q9P2K3 495 aaPredicted RBP18.6■□□□□ 0.57
SCARF1-202ENST00000348987 ANKRD34BA5PLL1 514 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 MEIS3P2A8K0S8 358 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 DAB1O75553 588 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 GPIP06744 558 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 SMIM10L2AP0DMW4 78 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 SMIM10L2BP0DMW5 78 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 FCGR1AP12314 374 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 NPR3P17342 541 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 CD68P34810 354 aaPredicted RBP18.6■□□□□ 0.57
SCARF1-202ENST00000348987 NR4A2P43354 598 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 TKTL1P51854 596 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 FAM83EQ2M2I3 478 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 IL31Q6EBC2 164 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 LARP4Q71RC2 724 aaKnown RBP eCLIP18.6■□□□□ 0.57
SCARF1-202ENST00000348987 GPR142Q7Z601 462 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 TFAP2DQ7Z6R9 452 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 ZCCHC7Q8N3Z6 543 aaKnown RBP18.6■□□□□ 0.57
SCARF1-202ENST00000348987 AFAP1L2Q8N4X5 818 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 FAR2Q96K12 515 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 MRPL57Q9BQC6 102 aaKnown RBP18.6■□□□□ 0.57
SCARF1-202ENST00000348987 RMND5AQ9H871 391 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 CHST12Q9NRB3 414 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 GIMAP2Q9UG22 337 aa18.6■□□□□ 0.57
SCARF1-202ENST00000348987 MRPL42Q9Y6G3 142 aaKnown RBP18.6■□□□□ 0.57
SCARF1-202ENST00000348987 FAM95CA0A1B0GW59 222 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 FXYD1O00168 92 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 UGT2B11O75310 529 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 LDLRP01130 860 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 S100BP04271 92 aaPredicted RBP18.59■□□□□ 0.57
SCARF1-202ENST00000348987 CAPN3P20807 821 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 PAFAH1B3Q15102 231 aaKnown RBP18.59■□□□□ 0.57
SCARF1-202ENST00000348987 PSMD5Q16401 504 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 ATAD3BQ5T9A4 648 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 MAGED4Q96JG8 741 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 PTPN18Q99952 460 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 MLPHQ9BV36 600 aaPredicted RBP18.59■□□□□ 0.57
SCARF1-202ENST00000348987 LTB4R2Q9NPC1 389 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 ZNF229Q9UJW7 825 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 BAG5Q9UL15 447 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 TIMM13Q9Y5L4 95 aaPredicted RBP18.59■□□□□ 0.57
SCARF1-202ENST00000348987 ZFC3H1O60293 1989 aaKnown RBP18.59■□□□□ 0.57
SCARF1-202ENST00000348987 H0YAE9 185 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 CD4P01730 458 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 BMP4P12644 408 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 ADRA1BP35368 520 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 AFF1P51825 1210 aaKnown RBP18.59■□□□□ 0.57
SCARF1-202ENST00000348987 CTF1Q16619 201 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 UGT3A2Q3SY77 523 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 UBXN11Q5T124 520 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 UGT3A1Q6NUS8 523 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 KIAA0408Q6ZU52 694 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 SLC22A17Q8WUG5 538 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 WNT8BQ93098 351 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 TNIP3Q96KP6 325 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 SLC30A3Q99726 388 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 ULBP1Q9BZM6 244 aa18.59■□□□□ 0.57
SCARF1-202ENST00000348987 EML4Q9HC35 981 aaKnown RBP18.59■□□□□ 0.57
SCARF1-202ENST00000348987 WDR6Q9NNW5 1121 aaKnown RBP18.59■□□□□ 0.57
SCARF1-202ENST00000348987 GMIPQ9P107 970 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms