RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 PCDHGB1Q9Y5G3 927 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 PCDHA9Q9Y5H5 950 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 SNX5Q9Y5X3 404 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 TLL2Q9Y6L7 1015 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 PMF1-BGLAPU3KQ54 211 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 SAGE2PA6NJ88 616 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 ZNF99A8MXY4 864 aaPredicted RBP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 INPP4BO15327 924 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 XYLBO75191 536 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 KCNK2O95069 426 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 PRSS23O95084 383 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 PTTG1O95997 202 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 HPRP00739 348 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 ARSAP15289 507 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 PRKCAP17252 672 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 ARF4P18085 180 aaPredicted RBP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 SLC6A2P23975 617 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 NOS2P35228 1153 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 COPZ1P61923 177 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 ZNF33AQ06730 810 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 DAG1Q14118 895 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 MAPK11Q15759 364 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 GEN1Q17RS7 908 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 SOWAHAQ2M3V2 549 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 TTC23Q5W5X9 447 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 PID1Q7Z2X4 250 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 CDR2LQ86X02 465 aaPredicted RBP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 CCDC117Q8IWD4 279 aaPredicted RBP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 KLHDC8BQ8IXV7 354 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 LGI2Q8N0V4 545 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 CHDHQ8NE62 594 aaPredicted RBP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 BPIFB1Q8TDL5 484 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 RASSF5Q8WWW0 418 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 SGCDQ92629 289 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 NTAN1Q96AB6 310 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 NXNL1Q96CM4 212 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 CCDC126Q96EE4 140 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 LRCH3Q96II8 777 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 MRPL57Q9BQC6 102 aaKnown RBP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 MRPL45Q9BRJ2 306 aaKnown RBP10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 DGCR6LQ9BY27 220 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 SPATC1LQ9H0A9 340 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 PRDM12Q9H4Q4 367 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 SPC25Q9HBM1 224 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 SETD4Q9NVD3 440 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 NPAP1Q9NZP6 1156 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 STAP1Q9ULZ2 295 aa10.3□□□□□ -0.76
CHRNA1-202ENST00000348749 ZFC3H1O60293 1989 aaKnown RBP10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 A0A0J9YYE9 177 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 LOC105371267A0A1B0GV96 52 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 EVPLLA8MZ36 301 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 DCLK1O15075 740 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 ARIH2O95376 493 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 CHRNA1P02708 482 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 ALPLP05186 524 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 IL7RP16871 459 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 CYP2B6P20813 491 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 ACVR2AP27037 513 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 CD68P34810 354 aaPredicted RBP10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 SCAPQ12770 1279 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 EPS8Q12929 822 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 ACOX1Q15067 660 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 ADPRMQ3LIE5 342 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 CUZD1Q86UP6 607 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 RAVER1Q8IY67 606 aaKnown RBP10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 ANGPTL6Q8NI99 470 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 CPB2Q96IY4 423 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 DACH2Q96NX9 599 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 PGLYRP2Q96PD5 576 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 CYP2S1Q96SQ9 504 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 FEM1AQ9BSK4 669 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 B3GNT5Q9BYG0 378 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 TRIM54Q9BYV2 358 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 CEP41Q9BYV8 373 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 DSN1Q9H410 356 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 PAK1IP1Q9NWT1 392 aaPredicted RBP10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 KLHL8Q9P2G9 620 aaPredicted RBP10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 MAGED2Q9UNF1 606 aaPredicted RBP10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 MFHAS1Q9Y4C4 1052 aa10.29□□□□□ -0.76
CHRNA1-202ENST00000348749 A0A087WZ62 844 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 UBXN8O00124 270 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 TAF4O00268 1085 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 UPK1AO00322 258 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 NR5A2O00482 541 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 TSPAN1O60635 241 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 INMTO95050 263 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 SEC24AO95486 1093 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 NDST3O95803 873 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 PGK1P00558 417 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 KRT6AP02538 564 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 KRT6BP04259 564 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 KRT8P05787 483 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 ABCB1P08183 1280 aaPredicted RBP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 HNRNPLP14866 589 aaKnown RBP eCLIP10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 PTPN3P26045 913 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 SULT1E1P49888 294 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 RAB10P61026 200 aa10.28□□□□□ -0.76
CHRNA1-202ENST00000348749 VAC14Q08AM6 782 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms