RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 ZRANB3Q5FWF4 1079 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 AARS2Q5JTZ9 985 aaKnown RBP20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 ARMC12Q5T9G4 340 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 TPGS1Q6ZTW0 290 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 RAB44Q7Z6P3 723 aaPredicted RBP20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 MYLK4Q86YV6 388 aaPredicted RBP20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 ELMOD1Q8N336 334 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 PTGR2Q8N8N7 351 aaPredicted RBP20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 KREMEN2Q8NCW0 462 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 STAG3L4Q8TBR4 150 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 ASB2Q96Q27 587 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 TCF25Q9BQ70 676 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 MRGBPQ9NV56 204 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 IL17CQ9P0M4 197 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 PKP3Q9Y446 797 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 ZNF711Q9Y462 761 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 LRRC42Q9Y546 428 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 COPG1Q9Y678 874 aaKnown RBP20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 UBXN8O00124 270 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 KERAO60938 352 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 FGBP02675 491 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 CD1EP15812 388 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 TBL3Q12788 808 aaKnown RBP20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 CHSY3Q70JA7 882 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 EXT2Q93063 718 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 MYO19Q96H55 970 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 GPR21Q99679 349 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 TM6SF2Q9BZW4 377 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 SMG9Q9H0W8 520 aaKnown RBP20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 CXXC1Q9P0U4 656 aaPredicted RBP20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 INSL6Q9Y581 213 aa20.27■□□□□ 0.84
CHRNA3-202ENST00000348639 CCL16O15467 120 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 HSPA8P11142 646 aaKnown RBP20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 HMGCLP35914 325 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 CSNK1DP48730 415 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 ADARP55265 1226 aaKnown RBP20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 HTRA4P83105 476 aaPredicted RBP20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 XIAPP98170 497 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 PPM1LQ5SGD2 360 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 NKAPQ8N5F7 415 aaKnown RBP20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 FIBINQ8TAL6 211 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 DTX3LQ8TDB6 740 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 SLC22A17Q8WUG5 538 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 PIH1D2Q8WWB5 315 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 GCNAQ96QF7 691 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 KIAA1522Q9P206 1035 aaPredicted RBP20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 FNDC3AQ9Y2H6 1198 aaKnown RBP20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 SMAD6O43541 496 aaKnown RBP20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 OR1I1O60431 355 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 VPS26AO75436 327 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 RPSAP08865 295 aaKnown RBP20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 SESN3P58005 492 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 RPL26P61254 145 aaKnown RBP20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 LMAN2Q12907 356 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 PFKFB4Q16877 469 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 CAMK1DQ8IU85 385 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 FBXW8Q8N3Y1 598 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 KYQ8NBH2 561 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 SHKBP1Q8TBC3 707 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 RSRC1Q96IZ7 334 aaKnown RBP20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 MARK4Q96L34 752 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 GPR63Q9BZJ6 419 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 COMMD10Q9Y6G5 202 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 DENND4CQ5VZ89 1909 aa20.26■□□□□ 0.83
CHRNA3-202ENST00000348639 A0A0U1RQS6 177 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 AIM2O14862 343 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 PRAMEF12O95522 483 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 PFKLP17858 780 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 VHLP40337 213 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 PTGER3P43115 390 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 MAPK8P45983 427 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 NUDT2P50583 147 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 ERVFC1P60507 584 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 CACNG1Q06432 222 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 CTSL3PQ5NE16 218 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 C16orf89Q6UX73 402 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 LYSMD3Q7Z3D4 306 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 METTL3Q86U44 580 aaKnown RBP20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 CLP1Q92989 425 aaKnown RBP20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 EID2BQ96D98 161 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 ZNF570Q96NI8 536 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 RNF112Q9ULX5 631 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 CLEC4EQ9ULY5 219 aa20.25■□□□□ 0.83
CHRNA3-202ENST00000348639 CCDC189A1A4V9 331 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 HIDE1A8MVS5 230 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 LEFTY2O00292 366 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 HTRA2O43464 458 aaPredicted RBP20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 PDE5AO76074 875 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 FGF4P08620 206 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 GFAPP14136 432 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 CTPS1P17812 591 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 TSPAN8P19075 237 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 MTTPP55157 894 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 PLPP4Q5VZY2 271 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 CLYBLQ8N0X4 340 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 STK40Q8N2I9 435 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 OR6K2Q8NGY2 324 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 KCNJ9Q92806 393 aa20.24■□□□□ 0.83
CHRNA3-202ENST00000348639 BADQ92934 168 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms