RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 RAB21Q9UL25 225 aa12.68□□□□□ -0.38
ERGIC3-202ENST00000348547 RIMKLBQ9ULI2 386 aa12.68□□□□□ -0.38
ERGIC3-202ENST00000348547 PCDHGA2Q9Y5H1 932 aa12.68□□□□□ -0.38
ERGIC3-202ENST00000348547 PCYT1BQ9Y5K3 369 aaPredicted RBP12.68□□□□□ -0.38
ERGIC3-202ENST00000348547 MAD1L1Q9Y6D9 718 aa12.68□□□□□ -0.38
ERGIC3-202ENST00000348547 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.68□□□□□ -0.38
ERGIC3-202ENST00000348547 CABIN1Q9Y6J0 2220 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 STX7O15400 261 aaKnown RBP12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 TM7SF2O76062 418 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 CRTAMO95727 393 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 SSTR1P30872 391 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 FOXN2P32314 431 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 MAGEA4P43358 317 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 BNC1Q01954 994 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 DPTQ07507 201 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 ARHGEF7Q14155 803 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 UAP1Q16222 522 aaPredicted RBP12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 LPAL2Q16609 132 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 ZNF648Q5T619 568 aaPredicted RBP12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 PSAPL1Q6NUJ1 521 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 CASC4Q6P4E1 433 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 ZNF765Q7L2R6 523 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 LDB1Q86U70 411 aaPredicted RBP12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 SLC22A18ASQ8N1D0 253 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 ASB12Q8WXK4 309 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 DNASE2BQ8WZ79 361 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 CDKN2AIPNLQ96HQ2 116 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 SPACA7Q96KW9 195 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 PHACTR1Q9C0D0 580 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 PCED1AQ9H1Q7 454 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 SEMA4AQ9H3S1 761 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 GPR27Q9NS67 375 aa12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 OAS3Q9Y6K5 1087 aaKnown RBP12.67□□□□□ -0.38
ERGIC3-202ENST00000348547 ZFC3H1O60293 1989 aaKnown RBP12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 TRBV5-4A0A0C4DH59 114 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 A0A1W2PPC4 97 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 A0A1W2PR77 199 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 C2orf81A6NN90 581 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 AGAP14A8MT82 685 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 H7C0S8 307 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 LZTS3O60299 673 aaPredicted RBP12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 VAPBO95292 243 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 FUCA1P04066 466 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 PGAM1P18669 254 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 TNNT3P45378 269 aaPredicted RBP12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 NUBP1P53384 320 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 SARNPP82979 210 aaKnown RBP12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 B4GALNT1Q00973 533 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 SFSWAPQ12872 951 aaKnown RBP12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 INPP5AQ14642 412 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 EFTUD2Q15029 972 aaKnown RBP eCLIP12.66□□□□□ -0.384e-7■■■■□ 23.1
ERGIC3-202ENST00000348547 KYNUQ16719 465 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 DNAJC21Q5F1R6 531 aaKnown RBP12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 ZNF789Q5FWF6 425 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 KIAA0930Q6ICG6 404 aaPredicted RBP12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 SLC36A4Q6YBV0 504 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 CAPN12Q6ZSI9 719 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 ABI3BPQ7Z7G0 1075 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 RELL1Q8IUW5 271 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 NRSN1Q8IZ57 195 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 NDUFAF2Q8N183 169 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 EIF1ADQ8N9N8 165 aaKnown RBP12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 MYRIPQ8NFW9 859 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 STYXQ8WUJ0 223 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 AP2M1Q96CW1 435 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 LENG8Q96PV6 779 aaPredicted RBP12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 PLEKHG4BQ96PX9 1271 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 FAM129AQ9BZQ8 928 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 FAM83DQ9H4H8 585 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 FAM86C1Q9NVL1 165 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 ZC3H7BQ9UGR2 993 aaKnown RBP12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 RAPGEFL1Q9UHV5 662 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 OR1A2Q9Y585 309 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 RPS6KL1Q9Y6S9 549 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 CEP250Q9BV73 2442 aa12.66□□□□□ -0.38
ERGIC3-202ENST00000348547 TDRD6O60522 2096 aaKnown RBP12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 GLYATL1P3A0A0U1RQE8 302 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 RGSL1A5PLK6 1076 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 CXorf49A8MYA2 514 aaPredicted RBP12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 EIF3HO15372 352 aaKnown RBP eCLIP12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 MAP3K13O43283 966 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 SGTAO43765 313 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 NDUFS2O75306 463 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 USP1O94782 785 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 PRAMEF1O95521 474 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 GOT2P00505 430 aaKnown RBP12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 PCCBP05166 539 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 ERVK-10P10266 1014 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 CD27P26842 260 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 MC4RP32245 332 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 TRIM23P36406 574 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 SPAM1P38567 509 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 PFN3P60673 137 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 CCDC15Q0P6D6 951 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 NFATC2Q13469 925 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 LRRC14Q15048 493 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 SETMARQ53H47 684 aaPredicted RBP12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 PNCKQ6P2M8 343 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 CENPUQ71F23 418 aa12.65□□□□□ -0.38
ERGIC3-202ENST00000348547 GPR161Q8N6U8 529 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms