RNA–Protein interactions for RNA: ENST00000347401.7

COL6A3-202, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-202ENST00000347401 ZNF70Q9UC06 446 aaPredicted RBP13.28□□□□□ -0.28
COL6A3-202ENST00000347401 FABP3P05413 133 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 LARS2Q15031 903 aaKnown RBP13.27□□□□□ -0.28
COL6A3-202ENST00000347401 ATCAYQ86WG3 371 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 RCN3Q96D15 328 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 KLQ9UEF7 1012 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 ZMYM5Q9UJ78 669 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 PRAMEF33A0A0G2JMD5 474 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 PRAMEF10O60809 474 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 FGFR2P21802 821 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 CCNHP51946 323 aaPredicted RBP13.27□□□□□ -0.28
COL6A3-202ENST00000347401 POLR2JP52435 117 aaKnown RBP13.27□□□□□ -0.28
COL6A3-202ENST00000347401 PHC1P78364 1004 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 SGCGQ13326 291 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 ZNF829Q3KNS6 432 aaPredicted RBP13.27□□□□□ -0.28
COL6A3-202ENST00000347401 SLC25A25Q6KCM7 469 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 TIGD4Q8IY51 512 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 SLC34A3Q8N130 599 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 RNF148Q8N7C7 305 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 C1orf21Q9H246 121 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 ALG5Q9Y673 324 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 CDK5RAP2Q96SN8 1893 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 C9P02748 559 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 ZNF45Q02386 682 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 RASGEF1BQ0VAM2 473 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 GRB14Q14449 540 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 C11orf65Q8NCR3 313 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 ADAM32Q8TC27 787 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 CEMIPQ8WUJ3 1361 aa13.27□□□□□ -0.28
COL6A3-202ENST00000347401 CYP3A7-CYP3A51PA0A087WV96 503 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 CETPP11597 493 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 CYP3A7P24462 503 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 LAMTOR4Q0VGL1 99 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 ADAM15Q13444 863 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 ADGRE1Q14246 886 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 ZIK1Q3SY52 487 aaPredicted RBP13.27□□□□□ -0.29
COL6A3-202ENST00000347401 BRINP3Q76B58 766 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 MAGED1Q9Y5V3 778 aaPredicted RBP13.27□□□□□ -0.29
COL6A3-202ENST00000347401 CBX4O00257 560 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 AGBL3Q8NEM8 1001 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 NR4A3Q92570 626 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 SYNDIG1Q9H7V2 258 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 PCDH12Q9NPG4 1184 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 SNX15Q9NRS6 342 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 MARK1Q9P0L2 795 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 MTRRQ9UBK8 725 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 SEC14L3Q9UDX4 400 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 ZNF510Q9Y2H8 683 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 CSPG5O95196 566 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 UROSP10746 265 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 RFX3P48380 749 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 LAPTM5Q13571 262 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 NDUFA9Q16795 377 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 RERGQ96A58 199 aaPredicted RBP13.27□□□□□ -0.29
COL6A3-202ENST00000347401 OGDHLQ9ULD0 1010 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 ACKR2O00590 384 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 TRUB2O95900 331 aaKnown RBP13.27□□□□□ -0.29
COL6A3-202ENST00000347401 PRR5P85299 388 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 METTL7BQ6UX53 244 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 CAMK1GQ96NX5 476 aa13.27□□□□□ -0.29
COL6A3-202ENST00000347401 EIF2B3Q9NR50 452 aaKnown RBP13.27□□□□□ -0.29
COL6A3-202ENST00000347401 KIR3DL1P43629 444 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 CERS6Q6ZMG9 384 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 PCDH10Q9P2E7 1040 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 NR2E1Q9Y466 385 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 LTFP02788 710 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 CKBP12277 381 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 RPL4P36578 427 aaKnown RBP13.26□□□□□ -0.29
COL6A3-202ENST00000347401 PCSK9Q8NBP7 692 aaKnown RBP13.26□□□□□ -0.29
COL6A3-202ENST00000347401 KLHL5Q96PQ7 755 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 SETD4Q9NVD3 440 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 NDUFS2O75306 463 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 ZNF432O94892 652 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 NUDT14O95848 222 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 URODP06132 367 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 RORAP35398 523 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 NTRK3Q16288 839 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 FOXR1Q6PIV2 292 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 CHSY3Q70JA7 882 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 IQCF2Q8IXL9 164 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 SAMD14Q8IZD0 417 aaPredicted RBP13.26□□□□□ -0.29
COL6A3-202ENST00000347401 ZNF639Q9UID6 485 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 AGLP35573 1532 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 PAPSS1O43252 624 aaPredicted RBP13.26□□□□□ -0.29
COL6A3-202ENST00000347401 NUAK1O60285 661 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 GNAZP19086 355 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 TFEBP19484 476 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 CYP4F2P78329 520 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 CYP4F3Q08477 520 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 PCDH20Q8N6Y1 951 aaKnown RBP13.26□□□□□ -0.29
COL6A3-202ENST00000347401 NFKBIZQ9BYH8 718 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 LAMA4Q16363 1823 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 AQP12BA6NM10 295 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 TTLL13PA6NNM8 815 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 CHURC1-FNTBB4DL54 471 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 XKRYO14609 159 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 FADS2O95864 444 aaKnown RBP13.26□□□□□ -0.29
COL6A3-202ENST00000347401 EFEMP1Q12805 493 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 ADGRG6Q86SQ4 1221 aa13.26□□□□□ -0.29
COL6A3-202ENST00000347401 AQP12AQ8IXF9 295 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms