RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 ALDH9A1P49189 494 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 PSMD5Q16401 504 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 USP39Q53GS9 565 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 C11orf63Q6NUN7 778 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 TMPRSS11FQ6ZWK6 438 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ATG9AQ7Z3C6 839 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ZBTB33Q86T24 672 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 FAM83AQ86UY5 434 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 LRRTM3Q86VH5 581 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ACOT11Q8WXI4 607 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 IER2Q9BTL4 223 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SDHAF2Q9NX18 166 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 PZPP20742 1482 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 TBX10O75333 385 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 LRIG2O94898 1065 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 IGFBP1P08833 259 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CYP7A1P22680 504 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 MRPL19P49406 292 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 EMP3P54852 163 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 GLO1Q04760 184 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CNTN1Q12860 1018 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 OGFRL1Q5TC84 451 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SLFN11Q7Z7L1 901 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 DSG4Q86SJ6 1040 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 PROSER1Q86XN7 944 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SVOPLQ8N434 492 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ADAM2Q99965 735 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 TBC1D17Q9HA65 648 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 PCDHA6Q9UN73 950 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SOWAHDA6NJG2 315 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 PIAS1O75925 651 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 NEK3P51956 506 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 SLC26A5P58743 744 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF484Q5JVG2 852 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 TPRG1LQ5T0D9 272 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 UQCC3Q6UW78 93 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 C11orf57Q6ZUT1 292 aaPredicted RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 IL17RDQ8NFM7 739 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 OR7G2Q8NG99 324 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 PHF10Q8WUB8 498 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 LMF1Q96S06 567 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CFAP97Q9P2B7 532 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ZNF518AQ6AHZ1 1483 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 URB2Q14146 1524 aaKnown RBP3.76□□□□□ -1.81
SYNE2-202ENST00000344113 H7C0C1 242 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 LILRB5O75023 590 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 CERS1P27544 350 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ATP5OP48047 213 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 RAB13P51153 203 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 GPC5P78333 572 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 VPS26BQ4G0F5 336 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 FAM47CQ5HY64 1035 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 ELMO3Q96BJ8 720 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 PRR12Q9ULL5 1215 aa3.76□□□□□ -1.81
SYNE2-202ENST00000344113 MYO9BQ13459 2157 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 NCF1P14598 390 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ERFP50548 548 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CAPZA1P52907 286 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 RTP1P59025 263 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TMPRSS11AQ6ZMR5 421 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 GJD3Q8N144 294 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TNFAIP8L1Q8WVP5 186 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 MTMR12Q9C0I1 747 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TNKS2Q9H2K2 1166 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 GGT7Q9UJ14 662 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 RIMKLBQ9ULI2 386 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 DERAQ9Y315 318 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 DMRT1Q9Y5R6 373 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 LCHNA4D1U4 455 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PLGP00747 810 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 NUDT2P50583 147 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TNK2Q07912 1038 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 DCLRE1AQ6PJP8 1040 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TMEM199Q8N511 208 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 BTN2A2Q8WVV5 523 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 AGAP2Q99490 1192 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 S100A14Q9HCY8 104 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ST8SIA5O15466 376 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 SGCEO43556 437 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 DBTP11182 482 aaKnown RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CDKN2CP42773 168 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 NR0B1P51843 470 aaKnown RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 AQP5P55064 265 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TTC38Q5R3I4 469 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PHF12Q96QT6 1004 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 CCNL2Q96S94 520 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 RBM4BQ9BQ04 359 aaKnown RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 RBM4Q9BWF3 364 aaKnown RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 ULBP1Q9BZM6 244 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TMEM206Q9H813 350 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 VRTNQ9H8Y1 702 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TPT1P8Q9HAU6 139 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 PHTF1Q9UMS5 762 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 TKTL1P51854 596 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 MXD4Q14582 209 aaPredicted RBP3.75□□□□□ -1.81
SYNE2-202ENST00000344113 RETSATQ6NUM9 610 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 FAM117BQ6P1L5 589 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 P4HA3Q7Z4N8 544 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 C7orf43Q8WVR3 580 aa3.75□□□□□ -1.81
SYNE2-202ENST00000344113 DNAJB3Q8WWF6 145 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms