RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 PIGXQ8TBF5 258 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 PIWIL2Q8TC59 973 aaKnown RBP17.59■□□□□ 0.41
SMAD4-201ENST00000342988 FAM83DQ9H4H8 585 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 MATN2O00339 956 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 CETPP11597 493 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 MAD2L1BPQ15013 274 aaPredicted RBP17.59■□□□□ 0.41
SMAD4-201ENST00000342988 EIPR1Q53HC9 387 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 CPTPQ5TA50 214 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 PPCDCQ96CD2 204 aa17.59■□□□□ 0.41
SMAD4-201ENST00000342988 PUS3Q9BZE2 481 aaKnown RBP17.59■□□□□ 0.41
SMAD4-201ENST00000342988 CORO1CQ9ULV4 474 aaPredicted RBP17.59■□□□□ 0.41
SMAD4-201ENST00000342988 SSX5O60225 188 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 RP2O75695 350 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 TUBP50607 506 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 BCL2A1Q16548 175 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 PLEKHN1Q494U1 663 aaPredicted RBP17.58■□□□□ 0.41
SMAD4-201ENST00000342988 GPR135Q8IZ08 494 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 OXR1Q8N573 874 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 ZNF398Q8TD17 642 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 NINJ1Q92982 152 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 SLC22A4Q9H015 551 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 PCDHB16Q9NRJ7 776 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 MT-CO1P00395 513 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 SLC5A9Q2M3M2 681 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 ZDHHC15Q96MV8 337 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 ERGIC2Q96RQ1 377 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 TBCBQ99426 244 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 CHIAQ9BZP6 476 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 CLIC5Q9NZA1 410 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 E7ENX8 843 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 ADAMDEC1O15204 470 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 CYP4F8P98187 520 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 GIT2Q14161 759 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 ZNF649Q9BS31 505 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 PTPRHQ9HD43 1115 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 SLAIN2Q9P270 581 aa17.58■□□□□ 0.41
SMAD4-201ENST00000342988 ATP7AQ04656 1500 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 ALX1Q15699 326 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 TMEM176AQ96HP8 235 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 HOPXQ9BPY8 73 aaPredicted RBP17.58■□□□□ 0.4
SMAD4-201ENST00000342988 ANKRA2Q9H9E1 313 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 ELOVL2Q9NXB9 296 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 POFUT2Q9Y2G5 429 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 TTLL8A6PVC2 850 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 AGRPO00253 132 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 TM7SF2O76062 418 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 HSD11B1P28845 292 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 PTENP60484 403 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 BDH1Q02338 343 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 OR5J2Q8NH18 312 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 COPS4Q9BT78 406 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 LAMP2P13473 410 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 PKNOX1P55347 436 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 TPTEP56180 551 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 GRK1Q15835 563 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 CD300LFQ8TDQ1 290 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 VCPIP1Q96JH7 1222 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 HSPA12BQ96MM6 686 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 LPIN3Q9BQK8 851 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 OR6C6A6NF89 314 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 IFNA1P01562 189 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 DUSP4Q13115 394 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 NKX1-1Q15270 411 aaPredicted RBP17.58■□□□□ 0.4
SMAD4-201ENST00000342988 STXBP5Q5T5C0 1151 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 SEC14L1Q92503 715 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 ELOVL4Q9GZR5 314 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 FARSBQ9NSD9 589 aaKnown RBP17.58■□□□□ 0.4
SMAD4-201ENST00000342988 ZNF180Q9UJW8 692 aa17.58■□□□□ 0.4
SMAD4-201ENST00000342988 TTC37Q6PGP7 1564 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 LARGE1O95461 756 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 ADIGQ0VDE8 80 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 RAET1GQ6H3X3 334 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 PRR23CQ6ZRP0 262 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 PHYKPLQ8IUZ5 450 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 ZSCAN4Q8NAM6 433 aaPredicted RBP17.57■□□□□ 0.4
SMAD4-201ENST00000342988 NXNL1Q96CM4 212 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 RGCCQ9H4X1 137 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 FESP07332 822 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 PLK1P53350 603 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 HMGCS2P54868 508 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 MC1RQ01726 317 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 GPR158Q5T848 1215 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 GPR139Q6DWJ6 353 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 EDARQ9UNE0 448 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 CNTNAP2Q9UHC6 1331 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 CAPN14A8MX76 684 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 TNFRSF10BO14763 440 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 TPP1O14773 563 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 SERPINA6P08185 405 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 NR2C1P13056 603 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 MAP3K8P41279 467 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 PPP3CAQ08209 521 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 LIPMQ5VYY2 423 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 ATG4AQ8WYN0 398 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 NXF3Q9H4D5 531 aaKnown RBP17.57■□□□□ 0.4
SMAD4-201ENST00000342988 ZDHHC6Q9H6R6 413 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 TRAV19A0A0A6YYK7 116 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 SPTLC1O15269 473 aa17.57■□□□□ 0.4
SMAD4-201ENST00000342988 CSTF1Q05048 431 aaKnown RBP17.57■□□□□ 0.4
SMAD4-201ENST00000342988 LAPTM4BQ86VI4 370 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms