RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 KBTBD6Q86V97 674 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 DENND1CQ8IV53 801 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 SELENOMQ8WWX9 145 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 NSUN5Q96P11 429 aaKnown RBP12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 OSBPL6Q9BZF3 934 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 TLR8Q9NR97 1041 aaKnown RBP12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 ARL15Q9NXU5 204 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 PLK2Q9NYY3 685 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 SDHDO14521 159 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 ULK1O75385 1050 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 RSL1D1O76021 490 aaKnown RBP12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 CDKL1Q00532 357 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 DMPKQ09013 629 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 BNIP2Q12982 314 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 LSAMPQ13449 338 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 CPNE9Q8IYJ1 553 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 CASP10Q92851 521 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 SH3KBP1Q96B97 665 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 SLC29A1Q99808 456 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 ZBED2Q9BTP6 218 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 ASB8Q9H765 288 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 CDC14AQ9UNH5 594 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 TOGARAM1Q9Y4F4 1720 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 PRORSD1PA6NEY8 169 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 G3V2T6 193 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 KPNA4O00629 521 aaPredicted RBP12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 RAD51BO15315 384 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 KRT75O95678 551 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 CKMP06732 381 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 ZNF182P17025 639 aaPredicted RBP12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 CCNCP24863 283 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 MC4RP32245 332 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 ATN1P54259 1190 aaPredicted RBP12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 ACAP2Q15057 778 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 ZNF789Q5FWF6 425 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 FAM151BQ6UXP7 276 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 GPRIN1Q7Z2K8 1008 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 SEPT8Q92599 483 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 C12orf43Q96C57 262 aaKnown RBP12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 MED8Q96G25 268 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 ZFYVE19Q96K21 471 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 SMOQ99835 787 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 FEM1AQ9BSK4 669 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 EPB41L1Q9H4G0 881 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 FBXO44Q9H4M3 255 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 HMG20AQ9NP66 347 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 GMIPQ9P107 970 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 PFKMP08237 780 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 ITGALP20701 1170 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 UGT1A1P22309 533 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 UGT1A4P22310 534 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 UGT1A3P35503 534 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 UGT1A5P35504 534 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 HPCAP84074 193 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 NIPAL4Q0D2K0 466 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 LAPTM4AQ15012 233 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 SYTL3Q4VX76 610 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 ADCK2Q7Z695 626 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 SLCO6A1Q86UG4 719 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 STYXQ8WUJ0 223 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 HPS1Q92902 700 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 GLT1D1Q96MS3 346 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 OR52E6Q96RD3 313 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 TRMOQ9BU70 441 aa12.38□□□□□ -0.43
SNRNP48-201ENST00000342415 HTRA2O43464 458 aaPredicted RBP12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 SEC24AO95486 1093 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 CAPN1P07384 714 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 MBL2P11226 248 aaPredicted RBP12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 HSPA7P48741 367 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 ZNF280AP59817 542 aaPredicted RBP12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 TBC1D21Q8IYX1 336 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 STX19Q8N4C7 294 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 ASB2Q96Q27 587 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 PCDH12Q9NPG4 1184 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 GMPR2Q9P2T1 348 aaKnown RBP12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 SLC13A4Q9UKG4 626 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 CCDC162PA2VCL2 907 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 G3V2L1 256 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 TLR5O60602 858 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 ANXA6P08133 673 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 PRKACGP22612 351 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 CREB5Q02930 508 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 PIGFQ07326 219 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 TTLL9Q3SXZ7 439 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 AARS2Q5JTZ9 985 aaKnown RBP12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 KLHL32Q96NJ5 620 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 PTCH2Q9Y6C5 1203 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 ECM29Q5VYK3 1845 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 ADAMTSL3P82987 1691 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 HMX2A2RU54 273 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 BOLA2-SMG1P6H3BVE0 249 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 NPHS1O60500 1241 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 NBNO60934 754 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 KRT6AP02538 564 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 KRT6BP04259 564 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 CYBBP04839 570 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 TTKP33981 857 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 KRT6CP48668 564 aa12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 ST13P50502 369 aaKnown RBP12.37□□□□□ -0.43
SNRNP48-201ENST00000342415 CRYBB1P53674 252 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms