RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 VWA7Q9Y334 891 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 DGKBQ9Y6T7 804 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 MAFKO60675 156 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 WARSP23381 471 aaKnown RBP22.31■■□□□ 1.16
TRIM28-202ENST00000341753 SHMT2P34897 504 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 ATP4BP51164 291 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 LIPEQ05469 1076 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 BTLAQ7Z6A9 289 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 ZNF354CQ86Y25 554 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 SNX19Q92543 992 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 PCED1BQ96HM7 432 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 KCTD14Q9BQ13 255 aaPredicted RBP22.31■■□□□ 1.16
TRIM28-202ENST00000341753 CD320Q9NPF0 282 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 MARCH4Q9P2E8 410 aaPredicted RBP22.31■■□□□ 1.16
TRIM28-202ENST00000341753 CFAP99D6REC4 459 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 UBXN8O00124 270 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 SNAP91O60641 907 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 BCL10O95999 233 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 TTKP33981 857 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 HALP42357 657 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 GEMP55040 296 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 MAXP61244 160 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 PFKFB4Q16877 469 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 FAM110CQ1W6H9 321 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 ITIH5Q86UX2 942 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 LPPQ93052 612 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 TMEM125Q96AQ2 219 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 GLT1D1Q96MS3 346 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 TSGA13Q96PP4 275 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 PARK7Q99497 189 aaKnown RBP22.31■■□□□ 1.16
TRIM28-202ENST00000341753 PCDHA9Q9Y5H5 950 aa22.31■■□□□ 1.16
TRIM28-202ENST00000341753 PTGESO14684 152 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 CDH3P22223 829 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 AXLP30530 894 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 ARSDP51689 593 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 WNT3AP56704 352 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 PIGFQ07326 219 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 SCIMPQ6UWF3 145 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 OR13F1Q8NGS4 319 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 DQX1Q8TE96 717 aaKnown RBP22.3■■□□□ 1.16
TRIM28-202ENST00000341753 RNF145Q96MT1 663 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 CSF3RQ99062 836 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 ANAPC2Q9UJX6 822 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 TCRBV5S2A0A599 114 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 SYNCRIPO60506 623 aaKnown RBP22.3■■□□□ 1.16
TRIM28-202ENST00000341753 CELF2O95319 508 aaKnown RBP22.3■■□□□ 1.16
TRIM28-202ENST00000341753 PNPLA4P41247 253 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 HLCSP50747 726 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 CLCN5P51795 746 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 PAGE3Q5JUK9 113 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 CCNYL2Q5T2Q4 361 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 SPRYD7Q5W111 196 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 PRMT9Q6P2P2 845 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 CHPT1Q8WUD6 406 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 ADNPQ9H2P0 1102 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 GID8Q9NWU2 228 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 POLG2Q9UHN1 485 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 EVLQ9UI08 416 aaPredicted RBP22.3■■□□□ 1.16
TRIM28-202ENST00000341753 ZNF232Q9UNY5 417 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 TIMM22Q9Y584 194 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 KCTD3Q9Y597 815 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 RSL1D1O76021 490 aaKnown RBP22.3■■□□□ 1.16
TRIM28-202ENST00000341753 LDLRP01130 860 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 PCNAP12004 261 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 CCNCP24863 283 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 HERVK_113P63132 956 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 ADAM17P78536 824 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 RANBP10Q6VN20 620 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 PHYKPLQ8IUZ5 450 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 ERVK-6Q9BXR3 956 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 LHPPQ9H008 270 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 ENTPD7Q9NQZ7 604 aa22.3■■□□□ 1.16
TRIM28-202ENST00000341753 AZIN1O14977 448 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 SULT1C4O75897 302 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 CTSHP09668 335 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 ZNF865P0CJ78 1059 aaPredicted RBP22.29■■□□□ 1.16
TRIM28-202ENST00000341753 LEPRP48357 1165 aaKnown RBP22.29■■□□□ 1.16
TRIM28-202ENST00000341753 RGS21Q2M5E4 152 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 PM20D1Q6GTS8 502 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 BHLHA9Q7RTU4 235 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 IGFN1Q86VF2 1251 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 SNX29P2Q8IUI4 249 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 ABHD8Q96I13 439 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 IL12RB2Q99665 862 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 H0Y858 1186 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 ALBP02768 609 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 GPIP06744 558 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 IL7RP16871 459 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 ITKQ08881 620 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 GALNT1Q10472 559 aaPredicted RBP22.29■■□□□ 1.16
TRIM28-202ENST00000341753 POLD3Q15054 466 aaPredicted RBP22.29■■□□□ 1.16
TRIM28-202ENST00000341753 LIMS2Q7Z4I7 341 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 PDZD8Q8NEN9 1154 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 ING2Q9H160 280 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 NANOGQ9H9S0 305 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 TLR9Q9NR96 1032 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 MPP6Q9NZW5 540 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 HACD3Q9P035 362 aa22.29■■□□□ 1.16
TRIM28-202ENST00000341753 ASPDHA6ND91 283 aa22.28■■□□□ 1.16
TRIM28-202ENST00000341753 MYADML2A6NDP7 307 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms