RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 LILRA2Q8N149 483 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 LRRC43Q8N309 656 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 AFAP1L2Q8N4X5 818 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 PCDH20Q8N6Y1 951 aaKnown RBP20.04■□□□□ 0.8
SPG7-202ENST00000341316 NMD3Q96D46 503 aaKnown RBP20.04■□□□□ 0.8
SPG7-202ENST00000341316 SCUBE2Q9NQ36 999 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 GALPQ9UBC7 116 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 PCDHGA7Q9Y5G6 932 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.04■□□□□ 0.8
SPG7-202ENST00000341316 ILVBLA1L0T0 632 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 CDK14O94921 469 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 CD160O95971 181 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 ALDH7A1P49419 539 aaKnown RBP20.04■□□□□ 0.8
SPG7-202ENST00000341316 FOXA1P55317 472 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 ZNF177Q13360 481 aaPredicted RBP20.04■□□□□ 0.8
SPG7-202ENST00000341316 RNF219Q5W0B1 726 aaPredicted RBP20.04■□□□□ 0.8
SPG7-202ENST00000341316 CXorf57Q6NSI4 855 aaKnown RBP20.04■□□□□ 0.8
SPG7-202ENST00000341316 KLHDC10Q6PID8 442 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 LINGO4Q6UY18 593 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 PDZD8Q8NEN9 1154 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 OR9I1Q8NGQ6 314 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 EPB41L1Q9H4G0 881 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 Q9H521 79 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 POPDC3Q9HBV1 291 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 AP4B1Q9Y6B7 739 aa20.04■□□□□ 0.8
SPG7-202ENST00000341316 PSMD12O00232 456 aaPredicted RBP20.03■□□□□ 0.8
SPG7-202ENST00000341316 TCN1P20061 433 aaPredicted RBP20.03■□□□□ 0.8
SPG7-202ENST00000341316 ME2P23368 584 aa20.03■□□□□ 0.8
SPG7-202ENST00000341316 ARF5P84085 180 aa20.03■□□□□ 0.8
SPG7-202ENST00000341316 TAF1AQ15573 450 aaPredicted RBP20.03■□□□□ 0.8
SPG7-202ENST00000341316 FBXO48Q5FWF7 155 aa20.03■□□□□ 0.8
SPG7-202ENST00000341316 ZFP1Q6P2D0 407 aa20.03■□□□□ 0.8
SPG7-202ENST00000341316 LPCAT1Q8NF37 534 aa20.03■□□□□ 0.8
SPG7-202ENST00000341316 PLD4Q96BZ4 506 aa20.03■□□□□ 0.8
SPG7-202ENST00000341316 INTS10Q9NVR2 710 aaKnown RBP20.03■□□□□ 0.8
SPG7-202ENST00000341316 RAB26Q9ULW5 256 aa20.03■□□□□ 0.8
SPG7-202ENST00000341316 DNAJC15Q9Y5T4 150 aa20.03■□□□□ 0.8
SPG7-202ENST00000341316 A0A1B0GTL3 188 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 ACOT8O14734 319 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 SNAP91O60641 907 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 RHOBTB1O94844 696 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 ALDOCP09972 364 aaKnown RBP20.02■□□□□ 0.8
SPG7-202ENST00000341316 GK3PQ14409 553 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 ADGRF1Q5T601 910 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 DEFB128Q7Z7B8 93 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 PIANPQ8IYJ0 282 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 RNF168Q8IYW5 571 aaPredicted RBP20.02■□□□□ 0.8
SPG7-202ENST00000341316 SLAIN1Q8ND83 568 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 OVCA2Q8WZ82 227 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 C19orf60Q96EN9 201 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 CNBD2Q96M20 576 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 SLC30A3Q99726 388 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 CFHR5Q9BXR6 569 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 MRPL1Q9BYD6 325 aaKnown RBP20.02■□□□□ 0.8
SPG7-202ENST00000341316 NDUFA13Q9P0J0 144 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 GIMAP2Q9UG22 337 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 RAI2Q9Y5P3 530 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 BACE2Q9Y5Z0 518 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 A0A1B0GVM2 712 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 GPC4O75487 556 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 HOXB8P17481 243 aaPredicted RBP20.02■□□□□ 0.8
SPG7-202ENST00000341316 PSME3P61289 254 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 PLD1Q13393 1074 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 LRP8Q14114 963 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 DEFB115Q30KQ5 88 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 REP15Q6BDI9 236 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 TICAM1Q8IUC6 712 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 RHEBL1Q8TAI7 183 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 KCNA7Q96RP8 456 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 PKP2Q99959 881 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 KLF16Q9BXK1 252 aaPredicted RBP20.02■□□□□ 0.8
SPG7-202ENST00000341316 TFB2MQ9H5Q4 396 aaKnown RBP20.02■□□□□ 0.8
SPG7-202ENST00000341316 RETREG1Q9H6L5 497 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 CWH43Q9H720 699 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 SMPD4Q9NXE4 827 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 CACNA2D2Q9NY47 1150 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 TRPM5Q9NZQ8 1165 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 LZTS1Q9Y250 596 aa20.02■□□□□ 0.8
SPG7-202ENST00000341316 E7ENX8 843 aa20.01■□□□□ 0.79
SPG7-202ENST00000341316 TFAP2AP05549 437 aa20.01■□□□□ 0.79
SPG7-202ENST00000341316 SLC5A9Q2M3M2 681 aa20.01■□□□□ 0.79
SPG7-202ENST00000341316 LARP7Q4G0J3 582 aaKnown RBP eCLIP20.01■□□□□ 0.79
SPG7-202ENST00000341316 PSAPL1Q6NUJ1 521 aa20.01■□□□□ 0.79
SPG7-202ENST00000341316 AFTPHQ6ULP2 937 aa20.01■□□□□ 0.79
SPG7-202ENST00000341316 IGSF21Q96ID5 467 aa20.01■□□□□ 0.79
SPG7-202ENST00000341316 KLHL32Q96NJ5 620 aa20.01■□□□□ 0.79
SPG7-202ENST00000341316 BIRC8Q96P09 236 aa20.01■□□□□ 0.79
SPG7-202ENST00000341316 MUC3BQ9H195 1237 aa20.01■□□□□ 0.79
SPG7-202ENST00000341316 AKTIPQ9H8T0 292 aa20.01■□□□□ 0.79
SPG7-202ENST00000341316 MID1IP1Q9NPA3 183 aa20.01■□□□□ 0.79
SPG7-202ENST00000341316 UTP6Q9NYH9 597 aaKnown RBP20.01■□□□□ 0.79
SPG7-202ENST00000341316 AFF4Q9UHB7 1163 aaKnown RBP20.01■□□□□ 0.79
SPG7-202ENST00000341316 BCAP29Q9UHQ4 241 aa20.01■□□□□ 0.79
SPG7-202ENST00000341316 ARIH1Q9Y4X5 557 aaPredicted RBP20.01■□□□□ 0.79
SPG7-202ENST00000341316 OR1I1O60431 355 aa20.01■□□□□ 0.79
SPG7-202ENST00000341316 BCAS2O75934 225 aaPredicted RBP20.01■□□□□ 0.79
SPG7-202ENST00000341316 SRP72O76094 671 aaKnown RBP20.01■□□□□ 0.79
SPG7-202ENST00000341316 CLPTM1O96005 669 aa20.01■□□□□ 0.79
SPG7-202ENST00000341316 RPL5P46777 297 aaKnown RBP20.01■□□□□ 0.79
SPG7-202ENST00000341316 TRAF2Q12933 501 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms