RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 PSMD8P48556 350 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 C2orf27AQ580R0 203 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 HECTD2Q5U5R9 776 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 FAM46CQ5VWP2 391 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 DENND1AQ8TEH3 1009 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 OMDQ99983 421 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 FAM107BQ9H098 131 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 RABEP2Q9H5N1 569 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 PRSS16Q9NQE7 514 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 MKS1Q9NXB0 559 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 CRLS1Q9UJA2 301 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 SARDHQ9UL12 918 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 SORCS3Q9UPU3 1222 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 VWA7Q9Y334 891 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 PLLPQ9Y342 182 aa17.28■□□□□ 0.36
CLDN4-201ENST00000340958 ANTXRLA6NF34 631 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 NEMP1O14524 444 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 HNRNPLP14866 589 aaKnown RBP eCLIP17.27■□□□□ 0.36
CLDN4-201ENST00000340958 ITGB7P26010 798 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 FMO4P31512 558 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 CDKN1CP49918 316 aaPredicted RBP17.27■□□□□ 0.36
CLDN4-201ENST00000340958 WDR4P57081 412 aaKnown RBP17.27■□□□□ 0.36
CLDN4-201ENST00000340958 PFKPQ01813 784 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 TYSND1Q2T9J0 566 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 RBM20Q5T481 1227 aaKnown RBP17.27■□□□□ 0.36
CLDN4-201ENST00000340958 ZDHHC20Q5W0Z9 365 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 FAM45BPQ6NSW5 357 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 PSAPL1Q6NUJ1 521 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 TXNDC11Q6PKC3 985 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 CDHR3Q6ZTQ4 885 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 PARS2Q7L3T8 475 aaKnown RBP17.27■□□□□ 0.36
CLDN4-201ENST00000340958 FAM45AQ8TCE6 357 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 DNASE1L2Q92874 299 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 ISL2Q96A47 359 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 C19orf43Q9BQ61 176 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 IL26Q9NPH9 171 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 TRPV5Q9NQA5 729 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 CORO1CQ9ULV4 474 aaPredicted RBP17.27■□□□□ 0.36
CLDN4-201ENST00000340958 ANKRD6Q9Y2G4 727 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 ACOT9Q9Y305 439 aa17.27■□□□□ 0.36
CLDN4-201ENST00000340958 GMNCA6NCL1 334 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 K7EQS6 105 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 ASMTLO95671 621 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 VIMP08670 466 aaKnown RBP17.26■□□□□ 0.35
CLDN4-201ENST00000340958 IRX4P78413 519 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 XIAPP98170 497 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 N4BP2L1Q5TBK1 243 aaPredicted RBP17.26■□□□□ 0.35
CLDN4-201ENST00000340958 CERS6Q6ZMG9 384 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 SNX20Q7Z614 316 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 TBC1D1Q86TI0 1168 aaPredicted RBP17.26■□□□□ 0.35
CLDN4-201ENST00000340958 CBARPQ8N350 705 aaPredicted RBP17.26■□□□□ 0.35
CLDN4-201ENST00000340958 ARMC2Q8NEN0 867 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 SCG3Q8WXD2 468 aaKnown RBP17.26■□□□□ 0.35
CLDN4-201ENST00000340958 FAM129BQ96TA1 746 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 TICRRQ7Z2Z1 1910 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 TOP3BO95985 862 aaKnown RBP17.26■□□□□ 0.35
CLDN4-201ENST00000340958 ELFN1P0C7U0 828 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 MAGEA12P43365 314 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 PTPN5P54829 565 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 TAS2R39P59534 338 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 ZXDAP98168 799 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 IRF9Q00978 393 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 TDGQ13569 410 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 ZNF460Q14592 562 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 KYAT3Q6YP21 454 aaKnown RBP17.26■□□□□ 0.35
CLDN4-201ENST00000340958 DPPA4Q7L190 304 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 CACUL1Q86Y37 369 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 CEP97Q8IW35 865 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 PIANPQ8IYJ0 282 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 ZNF398Q8TD17 642 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 CKAP2Q8WWK9 683 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 MAGEB18Q96M61 343 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 EPN3Q9H201 632 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 CD84Q9UIB8 345 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 HCN2Q9UL51 889 aa17.26■□□□□ 0.35
CLDN4-201ENST00000340958 A0A087X1B8 175 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 EGFP01133 1207 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 GSTA1P08263 222 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 C1SP09871 688 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 DRD1P21728 446 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 PGGT1BP53609 377 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 SEC24CP53992 1094 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 ELP6Q0PNE2 266 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 NFATC2Q13469 925 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 STARD3Q14849 445 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 ACOX1Q15067 660 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 CHRNA6Q15825 494 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 INSCQ1MX18 579 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 LYPLAL1Q5VWZ2 237 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 C16orf46Q6P387 395 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 GPR26Q8NDV2 337 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 LRRC8CQ8TDW0 803 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 EDAQ92838 391 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 ARRDC3Q96B67 414 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 CHMP6Q96FZ7 201 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 SCYL1Q96KG9 808 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 WRAP53Q9BUR4 548 aaKnown RBP17.25■□□□□ 0.35
CLDN4-201ENST00000340958 SPATA16Q9BXB7 569 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 GPAMQ9HCL2 828 aa17.25■□□□□ 0.35
CLDN4-201ENST00000340958 TCP11X1B4DZS4 312 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms