RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ORC2Q13416 577 aaPredicted RBP11.09□□□□□ -0.63
ATXN3-201ENST00000340660 KRTAP24-1Q3LI83 254 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 CES4AQ5XG92 561 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 PM20D1Q6GTS8 502 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 CAMKMTQ7Z624 323 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 LGI2Q8N0V4 545 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 GPD1LQ8N335 351 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 ATL2Q8NHH9 583 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 ZNF274Q96GC6 653 aaPredicted RBP11.09□□□□□ -0.63
ATXN3-201ENST00000340660 SGSM3Q96HU1 749 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 DUSP16Q9BY84 665 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 TNKS2Q9H2K2 1166 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 TAAR2Q9P1P5 351 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 HS3ST2Q9Y278 367 aa11.09□□□□□ -0.63
ATXN3-201ENST00000340660 H7C1Q1 480 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 SPTLC2O15270 562 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 TM7SF2O76062 418 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 ZBED1O96006 694 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 RRM1P23921 792 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 PPM1FP49593 454 aaPredicted RBP11.08□□□□□ -0.64
ATXN3-201ENST00000340660 TRIM29Q14134 588 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 INPP5AQ14642 412 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 KCNAB1Q14722 419 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 ZNF169Q14929 603 aaPredicted RBP11.08□□□□□ -0.64
ATXN3-201ENST00000340660 WSCD2Q2TBF2 565 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 DEFB113Q30KQ7 82 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 BSPRYQ5W0U4 402 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 CCAR2Q8N163 923 aaKnown RBP11.08□□□□□ -0.64
ATXN3-201ENST00000340660 CBARPQ8N350 705 aaPredicted RBP11.08□□□□□ -0.64
ATXN3-201ENST00000340660 OR10G6Q8NH81 332 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 PPP4R1Q8TF05 950 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 SYAP1Q96A49 352 aaPredicted RBP11.08□□□□□ -0.64
ATXN3-201ENST00000340660 FEM1AQ9BSK4 669 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 MENTQ9BUN1 341 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 ULBP1Q9BZM6 244 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 KCNN3Q9UGI6 736 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 OR51B4Q9Y5P0 310 aa11.08□□□□□ -0.64
ATXN3-201ENST00000340660 PIKFYVEQ9Y2I7 2098 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 FOXO6A8MYZ6 492 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 CCER2I3L3R5 266 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 AREL1O15033 823 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 STX6O43752 255 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 UNC5CO95185 931 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 CTDNEP1O95476 244 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 ANKRD34CP0C6C1 535 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 DLATP10515 647 aaKnown RBP11.07□□□□□ -0.64
ATXN3-201ENST00000340660 FGF5P12034 268 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 FDPSP14324 419 aaKnown RBP11.07□□□□□ -0.64
ATXN3-201ENST00000340660 CCNB1P14635 433 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 ATICP31939 592 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 SERPINB4P48594 390 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 TKTL1P51854 596 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 TRPC3Q13507 836 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 IL11RAQ14626 422 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 SURF1Q15526 300 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 C3AR1Q16581 482 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 TMEM119Q4V9L6 283 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 LRRC73Q5JTD7 316 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 B3GNTL1Q67FW5 361 aaPredicted RBP11.07□□□□□ -0.64
ATXN3-201ENST00000340660 MCTP1Q6DN14 999 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 MSANTD2Q6P1R3 559 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 BHLHB9Q6PI77 547 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 PIGZQ86VD9 579 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 GALNT12Q8IXK2 581 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 GALNT16Q8N428 558 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 OR56A4Q8NGH8 313 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 NCSTNQ92542 709 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 NR4A3Q92570 626 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 RMND5BQ96G75 393 aaPredicted RBP11.07□□□□□ -0.64
ATXN3-201ENST00000340660 FCRL2Q96LA5 508 aaPredicted RBP11.07□□□□□ -0.64
ATXN3-201ENST00000340660 C1QTNF7Q9BXJ2 289 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 RAB34Q9BZG1 259 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 ZSCAN16Q9H4T2 348 aaPredicted RBP11.07□□□□□ -0.64
ATXN3-201ENST00000340660 ZNHIT2Q9UHR6 403 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 TINAGQ9UJW2 476 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 ST14Q9Y5Y6 855 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 FHOD1Q9Y613 1164 aa11.07□□□□□ -0.64
ATXN3-201ENST00000340660 C16orf96A6NNT2 1141 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 YJEFN3A6XGL0 299 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 RASA4BC9J798 803 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 E7ENQ6 273 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 SMAD7O15105 426 aaKnown RBP11.06□□□□□ -0.64
ATXN3-201ENST00000340660 RASA4O43374 803 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 ZNF821O75541 412 aaPredicted RBP11.06□□□□□ -0.64
ATXN3-201ENST00000340660 CTAG2O75638 210 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 CDKL5O76039 1030 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 IPO13O94829 963 aaKnown RBP11.06□□□□□ -0.64
ATXN3-201ENST00000340660 ENDOD1O94919 500 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 AK4P27144 223 aaPredicted RBP11.06□□□□□ -0.64
ATXN3-201ENST00000340660 TBX4P57082 545 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 LRRC14Q15048 493 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 ZNF699Q32M78 642 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.06□□□□□ -0.64
ATXN3-201ENST00000340660 TTC38Q5R3I4 469 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 L1TD1Q5T7N2 865 aaKnown RBP11.06□□□□□ -0.64
ATXN3-201ENST00000340660 RAP1GAP2Q684P5 730 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 C22orf39Q6P5X5 142 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 TECPR1Q7Z6L1 1165 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 UNC93AQ86WB7 457 aa11.06□□□□□ -0.64
ATXN3-201ENST00000340660 DNAJB14Q8TBM8 379 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms