RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 HNRNPH2P55795 449 aaKnown RBP21.1■□□□□ 0.97
VRK2-201ENST00000340157 OCRLQ01968 901 aa21.1■□□□□ 0.97
VRK2-201ENST00000340157 OVGP1Q12889 678 aa21.1■□□□□ 0.97
VRK2-201ENST00000340157 CSHL1Q14406 222 aa21.1■□□□□ 0.97
VRK2-201ENST00000340157 HNRNPA1L2Q32P51 320 aaKnown RBP21.1■□□□□ 0.97
VRK2-201ENST00000340157 LRIT3Q3SXY7 679 aa21.1■□□□□ 0.97
VRK2-201ENST00000340157 POM121L1PQ3SYA9 428 aa21.1■□□□□ 0.97
VRK2-201ENST00000340157 CBARPQ8N350 705 aaPredicted RBP21.1■□□□□ 0.97
VRK2-201ENST00000340157 KDM1BQ8NB78 822 aa21.1■□□□□ 0.97
VRK2-201ENST00000340157 OR6Y1Q8NGX8 325 aa21.1■□□□□ 0.97
VRK2-201ENST00000340157 RAB3IL1Q8TBN0 382 aa21.1■□□□□ 0.97
VRK2-201ENST00000340157 GRAMD1AQ96CP6 724 aa21.1■□□□□ 0.97
VRK2-201ENST00000340157 ZDHHC4Q9NPG8 344 aa21.1■□□□□ 0.97
VRK2-201ENST00000340157 NUMBLQ9Y6R0 609 aa21.1■□□□□ 0.97
VRK2-201ENST00000340157 PLXNA2O75051 1894 aa21.1■□□□□ 0.97
VRK2-201ENST00000340157 LRRK1Q38SD2 2015 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 POU3F3P20264 500 aaPredicted RBP21.09■□□□□ 0.97
VRK2-201ENST00000340157 ILF2Q12905 390 aaKnown RBP21.09■□□□□ 0.97
VRK2-201ENST00000340157 NFATC2Q13469 925 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 ZNF805Q5CZA5 627 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 CTSL3PQ5NE16 218 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 TBC1D1Q86TI0 1168 aaPredicted RBP21.09■□□□□ 0.97
VRK2-201ENST00000340157 TRIM42Q8IWZ5 723 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 STK40Q8N2I9 435 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 SUSD6Q92537 303 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 FAM136AQ96C01 138 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 LRIG1Q96JA1 1093 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 TRMT61BQ9BVS5 477 aaKnown RBP21.09■□□□□ 0.97
VRK2-201ENST00000340157 OSBPL1AQ9BXW6 950 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 FBRSL1Q9HCM7 1045 aaKnown RBP21.09■□□□□ 0.97
VRK2-201ENST00000340157 XPR1Q9UBH6 696 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 SLC30A1Q9Y6M5 507 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 PIKFYVEQ9Y2I7 2098 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 TRBV5-4A0A0C4DH59 114 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 TBC1D3BA6NDS4 549 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 KAT7O95251 611 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 CCDC166P0CW27 439 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 ARRB2P32121 409 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 SPAM1P38567 509 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 EIF2DP41214 584 aaKnown RBP21.09■□□□□ 0.97
VRK2-201ENST00000340157 SOX9P48436 509 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 POLR2LP62875 67 aaKnown RBP21.09■□□□□ 0.97
VRK2-201ENST00000340157 CHRNA6Q15825 494 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 RNF187Q5TA31 235 aaPredicted RBP21.09■□□□□ 0.97
VRK2-201ENST00000340157 TAS2R42Q7RTR8 314 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 PCDH12Q9NPG4 1184 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 EPS15L1Q9UBC2 864 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 DKK3Q9UBP4 350 aa21.09■□□□□ 0.97
VRK2-201ENST00000340157 COL4A2P08572 1712 aa21.08■□□□□ 0.97
VRK2-201ENST00000340157 GLYATL1P3A0A0U1RQE8 302 aa21.08■□□□□ 0.97
VRK2-201ENST00000340157 UPK3BL1B0FP48 263 aa21.08■□□□□ 0.97
VRK2-201ENST00000340157 UPK3BL2E5RIL1 263 aa21.08■□□□□ 0.97
VRK2-201ENST00000340157 HTR4Q13639 388 aa21.08■□□□□ 0.97
VRK2-201ENST00000340157 ITIH4Q14624 930 aa21.08■□□□□ 0.97
VRK2-201ENST00000340157 TSNAXIP1Q2TAA8 658 aa21.08■□□□□ 0.97
VRK2-201ENST00000340157 ITPRIPL2Q3MIP1 535 aa21.08■□□□□ 0.97
VRK2-201ENST00000340157 AARS2Q5JTZ9 985 aaKnown RBP21.08■□□□□ 0.97
VRK2-201ENST00000340157 SNX20Q7Z614 316 aa21.08■□□□□ 0.97
VRK2-201ENST00000340157 SCYL1Q96KG9 808 aa21.08■□□□□ 0.97
VRK2-201ENST00000340157 ACOX2Q99424 681 aa21.08■□□□□ 0.97
VRK2-201ENST00000340157 P2RY12Q9H244 342 aa21.08■□□□□ 0.97
VRK2-201ENST00000340157 GALPQ9UBC7 116 aa21.08■□□□□ 0.97
VRK2-201ENST00000340157 GOLGA8CPA6NN73 597 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 ANHXE9PGG2 379 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 ITM2AO43736 263 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 APOA4P06727 396 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 LTA4HP09960 611 aaKnown RBP21.07■□□□□ 0.96
VRK2-201ENST00000340157 ZNF37AP17032 561 aaPredicted RBP21.07■□□□□ 0.96
VRK2-201ENST00000340157 UGT1A6P19224 532 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 UGT1A1P22309 533 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 UGT1A4P22310 534 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 UGT1A3P35503 534 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 UGT1A5P35504 534 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 IL12RB1P42701 662 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 ITGA9Q13797 1035 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 TECRLQ5HYJ1 363 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 ATG16L1Q676U5 607 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 ZYG11AQ6WRX3 759 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 PARS2Q7L3T8 475 aaKnown RBP21.07■□□□□ 0.96
VRK2-201ENST00000340157 SERPINA9Q86WD7 417 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 PBXIP1Q96AQ6 731 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 C7orf26Q96N11 449 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 TSNARE1Q96NA8 513 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 ASB8Q9H765 288 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 POPDC3Q9HBV1 291 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 APPL1Q9UKG1 709 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 VPS9D1Q9Y2B5 631 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 EDDM13A0A1B0GTR0 161 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 C16orf96A6NNT2 1141 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 AGAP14A8MT82 685 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 PKMP14618 531 aaKnown RBP21.07■□□□□ 0.96
VRK2-201ENST00000340157 IGFBP4P22692 258 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 VIPR1P32241 457 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 PTGER3P43115 390 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 ADARP55265 1226 aaKnown RBP21.07■□□□□ 0.96
VRK2-201ENST00000340157 RALGDSQ12967 914 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 STX3Q13277 289 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 EGFLAMQ63HQ2 1017 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 NAPRTQ6XQN6 538 aa21.07■□□□□ 0.96
VRK2-201ENST00000340157 RDH11Q8TC12 318 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms