RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 KCNA7Q96RP8 456 aa15.4■□□□□ 0.06
MBD1-203ENST00000339998 C2orf49Q9BVC5 232 aaPredicted RBP15.4■□□□□ 0.06
MBD1-203ENST00000339998 CDH22Q9UJ99 828 aa15.4■□□□□ 0.06
MBD1-203ENST00000339998 ZNF711Q9Y462 761 aa15.4■□□□□ 0.06
MBD1-203ENST00000339998 ARIH1Q9Y4X5 557 aaPredicted RBP15.4■□□□□ 0.06
MBD1-203ENST00000339998 HSPA8P11142 646 aaKnown RBP15.39■□□□□ 0.05
MBD1-203ENST00000339998 FOXA1P55317 472 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 NSUN2Q08J23 767 aaKnown RBP eCLIP15.39■□□□□ 0.05
MBD1-203ENST00000339998 ARMC12Q5T9G4 340 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 FAM91A1Q658Y4 838 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 AFTPHQ6ULP2 937 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 CUZD1Q86UP6 607 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 SPPL3Q8TCT6 385 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 MYO19Q96H55 970 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 GSTO2Q9H4Y5 243 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 C1orf232A0A0U1RR37 186 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 NPEPPSL1A6NEC2 478 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 PGLSO95336 258 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 RHOP08100 348 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 CHRM3P20309 590 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 MSX2P35548 267 aaPredicted RBP15.39■□□□□ 0.05
MBD1-203ENST00000339998 AGTR2P50052 363 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 CLCN4P51793 760 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 XIAPP98170 497 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 CUL3Q13618 768 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 FUT11Q495W5 492 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 TMPRSS6Q8IU80 811 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 C7orf61Q8IZ16 206 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 ELMOD1Q8N336 334 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 C12orf76Q8N812 135 aaPredicted RBP15.39■□□□□ 0.05
MBD1-203ENST00000339998 ZNF366Q8N895 744 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 VOPP1Q96AW1 172 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 TMEM106CQ9BVX2 250 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 IL17CQ9P0M4 197 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 SSX2IPQ9Y2D8 614 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 WNT6Q9Y6F9 365 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 ANP32DO95626 131 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 HNF1BP35680 557 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 BMPR1AP36894 532 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 ECT2LQ008S8 904 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 FPGSQ05932 587 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 BTKQ06187 659 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 POM121L1PQ3SYA9 428 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 UNC50Q53HI1 259 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 GRASPQ7Z6J2 395 aaPredicted RBP15.39■□□□□ 0.05
MBD1-203ENST00000339998 SUGP1Q8IWZ8 645 aaKnown RBP15.39■□□□□ 0.05
MBD1-203ENST00000339998 FAM217AQ8IXS0 508 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 CPNE9Q8IYJ1 553 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 GABPB2Q8TAK5 448 aaPredicted RBP15.39■□□□□ 0.05
MBD1-203ENST00000339998 EEF1AKMT1Q8WVE0 214 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 CCDC68Q9H2F9 335 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 FBRSL1Q9HCM7 1045 aaKnown RBP15.39■□□□□ 0.05
MBD1-203ENST00000339998 SLC7A8Q9UHI5 535 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 ASB1Q9Y576 335 aa15.39■□□□□ 0.05
MBD1-203ENST00000339998 AIM2O14862 343 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 EFCAB14O75071 495 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 RBP1P09455 135 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 BCL2L1Q07817 233 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 RETSATQ6NUM9 610 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 CCDC149Q6ZUS6 474 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 ULK2Q8IYT8 1036 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 HIPK4Q8NE63 616 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 TUBB6Q9BUF5 446 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 ASB3Q9Y575 518 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 SDHDO14521 159 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 RPSAP08865 295 aaKnown RBP15.38■□□□□ 0.05
MBD1-203ENST00000339998 SRCP12931 536 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 OGNP20774 298 aaKnown RBP15.38■□□□□ 0.05
MBD1-203ENST00000339998 COPAP53621 1224 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 C18orf21Q32NC0 220 aaPredicted RBP15.38■□□□□ 0.05
MBD1-203ENST00000339998 MPPE1Q53F39 396 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 PITRM1Q5JRX3 1037 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 ZNF678Q5SXM1 525 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 PIWIL4Q7Z3Z4 852 aaKnown RBP15.38■□□□□ 0.05
MBD1-203ENST00000339998 SNX32Q86XE0 403 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 GCNAQ96QF7 691 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 SIKE1Q9BRV8 207 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 PRKAG2Q9UGJ0 569 aa15.38■□□□□ 0.05
MBD1-203ENST00000339998 BTN3A1O00481 513 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 H2AFYO75367 372 aaKnown RBP15.37■□□□□ 0.05
MBD1-203ENST00000339998 COX4I1P13073 169 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 GFAPP14136 432 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 PRDX3P30048 256 aaKnown RBP15.37■□□□□ 0.05
MBD1-203ENST00000339998 SH3BP2P78314 561 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 CYHR1Q6ZMK1 362 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 CHST14Q8NCH0 376 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 LKAAEAR1Q8TD35 194 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 C3orf30Q96M34 536 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 BBS2Q9BXC9 721 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 TAS2R13Q9NYV9 303 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 CDYLQ9Y232 598 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 PRSS21Q9Y6M0 314 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 A0A088AWK7 358 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 NPIPB15A6NHN6 443 aaPredicted RBP15.37■□□□□ 0.05
MBD1-203ENST00000339998 SUPT3HB4E1H0 165 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 GAPDHSO14556 408 aaPredicted RBP15.37■□□□□ 0.05
MBD1-203ENST00000339998 SUPT3HO75486 399 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 NAA25Q14CX7 972 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 TRIM68Q6AZZ1 485 aa15.37■□□□□ 0.05
MBD1-203ENST00000339998 Q6ZVU0 165 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms