RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 DDI1Q8WTU0 396 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 BEGAINQ9BUH8 593 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 NDEL1Q9GZM8 345 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 POLR1EQ9GZS1 481 aaKnown RBP11.91□□□□□ -0.5
USP1-201ENST00000339950 RUBCNLQ9H714 662 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 RRN3Q9NYV6 651 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 C2orf81A6NN90 581 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 PLOD2O00469 737 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 DIRAS1O95057 198 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 CKMP06732 381 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 GJA1P17302 382 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 PRKACGP22612 351 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 HSPA7P48741 367 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 CDH18Q13634 790 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 MYLK3Q32MK0 819 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 POTEHQ6S545 545 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 APLFQ8IW19 511 aaPredicted RBP11.91□□□□□ -0.5
USP1-201ENST00000339950 CATSPER1Q8NEC5 780 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 GIPC3Q8TF64 312 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 STYXQ8WUJ0 223 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 RTP4Q96DX8 246 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 GLT1D1Q96MS3 346 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 TSSK3Q96PN8 268 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 ZBTB18Q99592 522 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 ZBTB26Q9HCK0 441 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 GID8Q9NWU2 228 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 SLAMF8Q9P0V8 285 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 AASSQ9UDR5 926 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 POLR3HQ9Y535 204 aaPredicted RBP11.91□□□□□ -0.5
USP1-201ENST00000339950 PCDHB5Q9Y5E4 795 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 COMMD3-BMI1R4GMX3 469 aa11.91□□□□□ -0.5
USP1-201ENST00000339950 KRT87PA6NCN2 255 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 SLCO1B7G3V0H7 640 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 AP3B1O00203 1094 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 HS6ST1O60243 411 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 MGEA5O60502 916 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 SEC22BO75396 215 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 MTX2O75431 263 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 VPS26AO75436 327 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 LBPP18428 481 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 MC4RP32245 332 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 TIFABQ6ZNK6 161 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 GALNT10Q86SR1 603 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 GPSM1Q86YR5 675 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 KDM1BQ8NB78 822 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 AURKBQ96GD4 344 aaPredicted RBP11.9□□□□□ -0.5
USP1-201ENST00000339950 TNKS2Q9H2K2 1166 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 DNAAF2Q9NVR5 837 aaKnown RBP11.9□□□□□ -0.5
USP1-201ENST00000339950 FCF1Q9Y324 198 aaKnown RBP11.9□□□□□ -0.5
USP1-201ENST00000339950 ASB3Q9Y575 518 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 J3QRK9 145 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 GSRP00390 522 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 OR1D2P34982 312 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 STT3AP46977 705 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 UFM1P61960 85 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 VAC14Q08AM6 782 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 ITGADQ13349 1161 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 PWP1Q13610 501 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 ZFP28Q8NHY6 868 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 CENPIQ92674 756 aaPredicted RBP11.9□□□□□ -0.5
USP1-201ENST00000339950 FBXL8Q96CD0 374 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 DGCR14Q96DF8 476 aaKnown RBP11.9□□□□□ -0.5
USP1-201ENST00000339950 NRBF2Q96F24 287 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 NSMCE2Q96MF7 247 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 ANKRD6Q9Y2G4 727 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 MBL2P11226 248 aaPredicted RBP11.9□□□□□ -0.5
USP1-201ENST00000339950 TUSC3Q13454 348 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 TUBB3Q13509 450 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 SLC2A7Q6PXP3 512 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 ANKRD23Q86SG2 305 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 RASAL3Q86YV0 1011 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 CLYBLQ8N0X4 340 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 TMEM86AQ8N2M4 240 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 KLHDC9Q8NEP7 349 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 FEM1CQ96JP0 617 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 C1orf21Q9H246 121 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 AMBNQ9NP70 447 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 GDAP2Q9NXN4 497 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 CACNA2D2Q9NY47 1150 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 PKD2L2Q9NZM6 624 aa11.9□□□□□ -0.5
USP1-201ENST00000339950 C6orf203Q9P0P8 240 aaPredicted RBP11.9□□□□□ -0.5
USP1-201ENST00000339950 F5P12259 2224 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 MAFKO60675 156 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 C1QAP02745 245 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 AXLP30530 894 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 SPPL2BQ8TCT7 592 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 ACTR8Q9H981 624 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 RCOR3Q9P2K3 495 aaPredicted RBP11.89□□□□□ -0.51
USP1-201ENST00000339950 CNOT6Q9ULM6 557 aaKnown RBP11.89□□□□□ -0.51
USP1-201ENST00000339950 KCNH4Q9UQ05 1017 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 DOCK3Q8IZD9 2030 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 PFDN6O15212 129 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 CHRNA1P02708 482 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 OCM2P0CE71 109 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 OCMP0CE72 109 aaPredicted RBP11.89□□□□□ -0.51
USP1-201ENST00000339950 PRKAR2AP13861 404 aaKnown RBP11.89□□□□□ -0.51
USP1-201ENST00000339950 MRPS15P82914 257 aaKnown RBP11.89□□□□□ -0.51
USP1-201ENST00000339950 LIPEQ05469 1076 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 LRRC74AQ0VAA2 488 aa11.89□□□□□ -0.51
USP1-201ENST00000339950 ZBTB6Q15916 424 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms