RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ARHGAP9Q9BRR9 750 aa19.34■□□□□ 0.69
ITGA4-202ENST00000339307 TDRD1Q9BXT4 1180 aaKnown RBP19.34■□□□□ 0.69
ITGA4-202ENST00000339307 PACSIN1Q9BY11 444 aa19.34■□□□□ 0.69
ITGA4-202ENST00000339307 PCDH9Q9HC56 1237 aa19.34■□□□□ 0.69
ITGA4-202ENST00000339307 KCNK4Q9NYG8 393 aa19.34■□□□□ 0.69
ITGA4-202ENST00000339307 FOXJ2Q9P0K8 574 aa19.34■□□□□ 0.69
ITGA4-202ENST00000339307 UVRAGQ9P2Y5 699 aa19.34■□□□□ 0.69
ITGA4-202ENST00000339307 ST14Q9Y5Y6 855 aa19.34■□□□□ 0.69
ITGA4-202ENST00000339307 MGAQ8IWI9 3026 aa19.33■□□□□ 0.69
ITGA4-202ENST00000339307 PPM1DO15297 605 aa19.33■□□□□ 0.68
ITGA4-202ENST00000339307 SOD1P00441 154 aa19.33■□□□□ 0.68
ITGA4-202ENST00000339307 ATP1A1P05023 1023 aaKnown RBP19.33■□□□□ 0.68
ITGA4-202ENST00000339307 HLA-DQB2P05538 268 aa19.33■□□□□ 0.68
ITGA4-202ENST00000339307 PYGLP06737 847 aa19.33■□□□□ 0.68
ITGA4-202ENST00000339307 CCL4P13236 92 aa19.33■□□□□ 0.68
ITGA4-202ENST00000339307 MESDQ14696 234 aa19.33■□□□□ 0.68
ITGA4-202ENST00000339307 VASH2Q86V25 355 aa19.33■□□□□ 0.68
ITGA4-202ENST00000339307 CCDC13Q8IYE1 715 aa19.33■□□□□ 0.68
ITGA4-202ENST00000339307 JPH3Q8WXH2 748 aaPredicted RBP19.33■□□□□ 0.68
ITGA4-202ENST00000339307 AHCYL2Q96HN2 611 aaKnown RBP19.33■□□□□ 0.68
ITGA4-202ENST00000339307 CCDC74BQ96LY2 380 aa19.33■□□□□ 0.68
ITGA4-202ENST00000339307 DNPEPQ9ULA0 475 aa19.33■□□□□ 0.68
ITGA4-202ENST00000339307 PRKAB1Q9Y478 270 aa19.33■□□□□ 0.68
ITGA4-202ENST00000339307 IGHV5-10-1A0A0J9YXX1 117 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 C1orf232A0A0U1RR37 186 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 EFSO43281 561 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 JCHAINP01591 159 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 CD1CP29017 333 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 CD86P42081 329 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 GPR3P46089 330 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 STC1P52823 247 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 NIPAL4Q0D2K0 466 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 IHHQ14623 411 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 PYCR3Q53H96 274 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 ZNF574Q6ZN55 896 aaPredicted RBP19.32■□□□□ 0.68
ITGA4-202ENST00000339307 CHST15Q7LFX5 561 aaPredicted RBP19.32■□□□□ 0.68
ITGA4-202ENST00000339307 KDELC2Q7Z4H8 507 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 C17orf82Q86X59 251 aaPredicted RBP19.32■□□□□ 0.68
ITGA4-202ENST00000339307 ZNF761Q86XN6 746 aaPredicted RBP19.32■□□□□ 0.68
ITGA4-202ENST00000339307 NRSN1Q8IZ57 195 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 ZSCAN1Q8NBB4 408 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 ARRDC2Q8TBH0 407 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.32■□□□□ 0.68
ITGA4-202ENST00000339307 TSGA13Q96PP4 275 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 SLC38A3Q99624 504 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 MAK16Q9BXY0 300 aaKnown RBP19.32■□□□□ 0.68
ITGA4-202ENST00000339307 XPO4Q9C0E2 1151 aaKnown RBP19.32■□□□□ 0.68
ITGA4-202ENST00000339307 ZNHIT6Q9NWK9 470 aaKnown RBP19.32■□□□□ 0.68
ITGA4-202ENST00000339307 AMACRQ9UHK6 382 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 HEY1Q9Y5J3 304 aa19.32■□□□□ 0.68
ITGA4-202ENST00000339307 LRRD1A4D1F6 860 aa19.31■□□□□ 0.68
ITGA4-202ENST00000339307 C9orf172C9J069 976 aa19.31■□□□□ 0.68
ITGA4-202ENST00000339307 KCNK1O00180 336 aa19.31■□□□□ 0.68
ITGA4-202ENST00000339307 ODF2Q5BJF6 829 aa19.31■□□□□ 0.68
ITGA4-202ENST00000339307 ZNF765Q7L2R6 523 aa19.31■□□□□ 0.68
ITGA4-202ENST00000339307 ZNF438Q7Z4V0 828 aa19.31■□□□□ 0.68
ITGA4-202ENST00000339307 PQLC3Q8N755 202 aa19.31■□□□□ 0.68
ITGA4-202ENST00000339307 CCHCR1Q8TD31 782 aa19.31■□□□□ 0.68
ITGA4-202ENST00000339307 SGF29Q96ES7 293 aa19.31■□□□□ 0.68
ITGA4-202ENST00000339307 MED8Q96G25 268 aa19.31■□□□□ 0.68
ITGA4-202ENST00000339307 PKD2L2Q9NZM6 624 aa19.31■□□□□ 0.68
ITGA4-202ENST00000339307 LCMT1Q9UIC8 334 aa19.31■□□□□ 0.68
ITGA4-202ENST00000339307 ACSL6Q9UKU0 697 aa19.31■□□□□ 0.68
ITGA4-202ENST00000339307 AKR1B10O60218 316 aa19.3■□□□□ 0.68
ITGA4-202ENST00000339307 SNX2O60749 519 aa19.3■□□□□ 0.68
ITGA4-202ENST00000339307 KDELR1P24390 212 aa19.3■□□□□ 0.68
ITGA4-202ENST00000339307 CSTF2P33240 577 aaKnown RBP eCLIP19.3■□□□□ 0.68
ITGA4-202ENST00000339307 AP1B1Q10567 949 aa19.3■□□□□ 0.68
ITGA4-202ENST00000339307 SLC10A2Q12908 348 aaPredicted RBP19.3■□□□□ 0.68
ITGA4-202ENST00000339307 SLC18A3Q16572 532 aa19.3■□□□□ 0.68
ITGA4-202ENST00000339307 SNAP47Q5SQN1 464 aa19.3■□□□□ 0.68
ITGA4-202ENST00000339307 FAM182AQ5T1J6 154 aa19.3■□□□□ 0.68
ITGA4-202ENST00000339307 ALG1LQ6GMV1 187 aa19.3■□□□□ 0.68
ITGA4-202ENST00000339307 RAPGEF5Q92565 580 aa19.3■□□□□ 0.68
ITGA4-202ENST00000339307 SCARF2Q96GP6 870 aaPredicted RBP19.3■□□□□ 0.68
ITGA4-202ENST00000339307 MLPHQ9BV36 600 aaPredicted RBP19.3■□□□□ 0.68
ITGA4-202ENST00000339307 ADGRE3Q9BY15 652 aa19.3■□□□□ 0.68
ITGA4-202ENST00000339307 FAM83DQ9H4H8 585 aa19.3■□□□□ 0.68
ITGA4-202ENST00000339307 DTLQ9NZJ0 730 aa19.3■□□□□ 0.68
ITGA4-202ENST00000339307 GCN1Q92616 2671 aaKnown RBP19.3■□□□□ 0.68
ITGA4-202ENST00000339307 SCN8AQ9UQD0 1980 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 IGHV1OR21-1A0A087WYE8 117 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 HGSO14964 777 aaPredicted RBP19.29■□□□□ 0.68
ITGA4-202ENST00000339307 PRLP01236 227 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 SLC4A1P02730 911 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 TNNT1P13805 278 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 LIMK2P53671 638 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 RPL26P61254 145 aaKnown RBP19.29■□□□□ 0.68
ITGA4-202ENST00000339307 LRP8Q14114 963 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 GALNT3Q14435 633 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 NR1D2Q14995 579 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 CLPPQ16740 277 aaPredicted RBP19.29■□□□□ 0.68
ITGA4-202ENST00000339307 FAM129CQ86XR2 697 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 CCDC112Q8NEF3 446 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 EXTL1Q92935 676 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 FATE1Q969F0 183 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 HDAC11Q96DB2 347 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 RNF157Q96PX1 679 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 CEP41Q9BYV8 373 aa19.29■□□□□ 0.68
ITGA4-202ENST00000339307 RPL26L1Q9UNX3 145 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms