RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 MESP2Q0VG99 397 aa22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 CTSL3PQ5NE16 218 aa22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 NPAS3Q8IXF0 933 aa22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 PCDH20Q8N6Y1 951 aaKnown RBP22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 ZNF366Q8N895 744 aa22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 ILKAPQ9H0C8 392 aaPredicted RBP22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 COG4Q9H9E3 785 aa22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 TAS2R13Q9NYV9 303 aa22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 MARK1Q9P0L2 795 aa22.33■■□□□ 1.16
PDLIM2-203ENST00000339162 ATG2AQ2TAZ0 1938 aa22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 GAPDHSO14556 408 aaPredicted RBP22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 SLC9A3R1O14745 358 aaPredicted RBP22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 DIAPH2O60879 1101 aa22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 ARSAP15289 507 aa22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 TCF3P15923 654 aa22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 SULT2A1Q06520 285 aa22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 ASRGL1Q7L266 308 aa22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 AHI1Q8N157 1196 aa22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 OR2A12Q8NGT7 310 aa22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 MAPK15Q8TD08 544 aa22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 EBF3Q9H4W6 596 aa22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 IL26Q9NPH9 171 aa22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 ZDHHC2Q9UIJ5 367 aa22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 ZMYM5Q9UJ78 669 aa22.32■■□□□ 1.16
PDLIM2-203ENST00000339162 POP4O95707 220 aaKnown RBP22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 PKMP14618 531 aaKnown RBP22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 HNRNPLP14866 589 aaKnown RBP eCLIP22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 BPIP17213 487 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 UGT1A6P19224 532 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 UGT1A1P22309 533 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 UGT1A4P22310 534 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 UGT1A3P35503 534 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 UGT1A5P35504 534 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 CACNG1Q06432 222 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 TUBB3Q13509 450 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 EML3Q32P44 896 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 CRTC1Q6UUV9 634 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 GET4Q7L5D6 327 aaPredicted RBP22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 SIDT2Q8NBJ9 832 aaKnown RBP22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 OSCP1Q8WVF1 389 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 FGF13Q92913 245 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 OTOL1A6NHN0 477 aaPredicted RBP22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 POU2F2P09086 479 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 ADH5P11766 374 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 HOXB8P17481 243 aaPredicted RBP22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 SLC26A3P40879 764 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 UBAP2LQ14157 1087 aaKnown RBP22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 OR4D1Q15615 310 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 CFAP157Q5JU67 520 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 ECHDC3Q96DC8 303 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 MRGPRX3Q96LB0 322 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 KLHL32Q96NJ5 620 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 CEP44Q9C0F1 390 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 ASB8Q9H765 288 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 SARS2Q9NP81 518 aaKnown RBP22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 IKZF3Q9UKT9 509 aa22.31■■□□□ 1.16
PDLIM2-203ENST00000339162 IPO13O94829 963 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 SKIV2L2P42285 1042 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 DGKGP49619 791 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 SLC9B1Q4ZJI4 515 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 LRRC66Q68CR7 880 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 KIAA0907Q7Z7F0 614 aaPredicted RBP22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 SLC7A6OSQ96CW6 309 aaPredicted RBP22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 TUBGCP5Q96RT8 1024 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 SIKE1Q9BRV8 207 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 BOCQ9BWV1 1114 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 SFXN1Q9H9B4 322 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 NCKIPSDQ9NZQ3 722 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 RAP2CQ9Y3L5 183 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 C2orf16Q68DN1 1984 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 CHRM1P11229 460 aaPredicted RBP22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 NQO1P15559 274 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 CHRM3P20309 590 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 PRKAA2P54646 552 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 KCNC3Q14003 757 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 DMC1Q14565 340 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 FAM219BQ5XKK7 198 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 RFLNAQ6ZTI6 216 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 SERPINA9Q86WD7 417 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 TREML1Q86YW5 311 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 SCRN2Q96FV2 425 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 ASB16Q96NS5 453 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 CPEB1Q9BZB8 566 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 POPDC3Q9HBV1 291 aa22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 APOBEC2Q9Y235 224 aaKnown RBP22.3■■□□□ 1.16
PDLIM2-203ENST00000339162 CXorf51AA0A1B0GTR3 108 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 TMEM233B4DJY2 109 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 KRT16P08779 473 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 ALOX15P16050 662 aaPredicted RBP22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 LHCGRP22888 699 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 FSHRP23945 695 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 RPL14P50914 215 aaKnown RBP22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 RAD51Q06609 339 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 AARS2Q5JTZ9 985 aaKnown RBP22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 ZNF557Q8N988 423 aaPredicted RBP22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 GIMAP7Q8NHV1 300 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 SAR1AQ9NR31 198 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 ARHGEF3Q9NR81 526 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 VPS9D1Q9Y2B5 631 aa22.29■■□□□ 1.16
PDLIM2-203ENST00000339162 STK38LQ9Y2H1 464 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms