RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ELOCQ15369 112 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 HENMT1Q5T8I9 393 aaKnown RBP15.19■□□□□ 0.02
PRKN-201ENST00000338468 HES3Q5TGS1 186 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 LVRNQ6Q4G3 990 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 ZNF662Q6ZS27 426 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 TMC3Q7Z5M5 1100 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 TRIM74Q86UV6 250 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 TMPRSS12Q86WS5 348 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 UBL4BQ8N7F7 174 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 CCL4L1Q8NHW4 92 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 SCARF2Q96GP6 870 aaPredicted RBP15.19■□□□□ 0.02
PRKN-201ENST00000338468 COX14Q96I36 57 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 TSGA10Q9BZW7 698 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 GOLGA6AQ9NYA3 693 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 TRHDEQ9UKU6 1024 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 SHOC2Q9UQ13 582 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 R3HDM2Q9Y2K5 976 aaKnown RBP15.19■□□□□ 0.02
PRKN-201ENST00000338468 ZNF711Q9Y462 761 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 ST14Q9Y5Y6 855 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 URB1O60287 2271 aaKnown RBP15.19■□□□□ 0.02
PRKN-201ENST00000338468 ASXL3Q9C0F0 2248 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 COL27A1Q8IZC6 1860 aaPredicted RBP15.18■□□□□ 0.02
PRKN-201ENST00000338468 A0A087WV48 116 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 EME2A4GXA9 379 aaPredicted RBP15.18■□□□□ 0.02
PRKN-201ENST00000338468 FADS2P1A8MWK0 482 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 PDE2AO00408 941 aaPredicted RBP15.18■□□□□ 0.02
PRKN-201ENST00000338468 AURKAO14965 403 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 CASC3O15234 703 aaKnown RBP15.18■□□□□ 0.02
PRKN-201ENST00000338468 CETN2P41208 172 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 CHRNA4P43681 627 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 CYP4F3Q08477 520 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 NR0B2Q15466 257 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 SIRPB2Q5JXA9 342 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 PERM1Q5SV97 790 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 NRROSQ86YC3 692 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 CDKL3Q8IVW4 592 aaPredicted RBP15.18■□□□□ 0.02
PRKN-201ENST00000338468 SFTPA2Q8IWL1 248 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 SDR16C5Q8N3Y7 309 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 KYQ8NBH2 561 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 IFI44Q8TCB0 444 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 GBA3Q9H227 469 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 FAM83DQ9H4H8 585 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 GRPEL1Q9HAV7 217 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 ZFYVE1Q9HBF4 777 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 SUFUQ9UMX1 484 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 TMEM98Q9Y2Y6 226 aa15.18■□□□□ 0.02
PRKN-201ENST00000338468 PCYT1BQ9Y5K3 369 aaPredicted RBP15.18■□□□□ 0.02
PRKN-201ENST00000338468 SCN8AQ9UQD0 1980 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 RGSL1A5PLK6 1076 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 TRABD2BA6NFA1 517 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 INPP4BO15327 924 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 KCNN4O15554 427 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 KRT86O43790 486 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 OPA1O60313 960 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 ZIC2O95409 532 aaPredicted RBP15.17■□□□□ 0.02
PRKN-201ENST00000338468 EPOP01588 193 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 GP1BAP07359 652 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 ABCG1P45844 678 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 DUSP3P51452 185 aaPredicted RBP15.17■□□□□ 0.02
PRKN-201ENST00000338468 ANKRD20A2Q5SQ80 823 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 ANKRD20A1Q5TYW2 823 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 ANKRD20A3Q5VUR7 823 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 CDCP2Q5VXM1 449 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 DARS2Q6PI48 645 aaKnown RBP15.17■□□□□ 0.02
PRKN-201ENST00000338468 EFL1Q7Z2Z2 1120 aaKnown RBP15.17■□□□□ 0.02
PRKN-201ENST00000338468 GKN2Q86XP6 184 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 PDCD7Q8N8D1 485 aaKnown RBP15.17■□□□□ 0.02
PRKN-201ENST00000338468 GPR26Q8NDV2 337 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 CCHCR1Q8TD31 782 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 GPBAR1Q8TDU6 330 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 HIC2Q96JB3 615 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 UBL7Q96S82 380 aaPredicted RBP15.17■□□□□ 0.02
PRKN-201ENST00000338468 CARS2Q9HA77 564 aaKnown RBP15.17■□□□□ 0.02
PRKN-201ENST00000338468 PKD2L2Q9NZM6 624 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 NCKIPSDQ9NZQ3 722 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 SIRPGQ9P1W8 387 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 NFKBIL1Q9UBC1 381 aaPredicted RBP15.17■□□□□ 0.02
PRKN-201ENST00000338468 RSPH14Q9UHP6 348 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 MOSPD1Q9UJG1 213 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 GPR34Q9UPC5 381 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 OAS3Q9Y6K5 1087 aaKnown RBP15.17■□□□□ 0.02
PRKN-201ENST00000338468 BPTFQ12830 3046 aa15.17■□□□□ 0.02
PRKN-201ENST00000338468 KNTC1P50748 2209 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 MYLKQ15746 1914 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 CPED1A4D0V7 1026 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 NOBOXO60393 691 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 PYGLP06737 847 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 IVLP07476 585 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 JUPP14923 745 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 BPIP17213 487 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 ADRA1AP35348 466 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 GNPDA1P46926 289 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 E2F1Q01094 437 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 C19orf57Q0VDD7 668 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 TARDBPQ13148 414 aaKnown RBP eCLIP15.16■□□□□ 0.02
PRKN-201ENST00000338468 MPP3Q13368 585 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 SLC1A5Q15758 541 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 MEI1Q5TIA1 1274 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 OGFOD3Q6PK18 319 aa15.16■□□□□ 0.02
PRKN-201ENST00000338468 DOK6Q6PKX4 331 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms