RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 IVLP07476 585 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 ACTR1BP42025 376 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 NOP2P46087 812 aaKnown RBP13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 MAPK10P53779 464 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 ACTR1AP61163 376 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 DYNLT1P63172 113 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 VAC14Q08AM6 782 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 AP1B1Q10567 949 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 ILF3Q12906 894 aaKnown RBP eCLIP13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 LY6DQ14210 128 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 GALNT3Q14435 633 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 TSR1Q2NL82 804 aaKnown RBP13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 PYCR3Q53H96 274 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 TIGD7Q6NT04 549 aaPredicted RBP13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 ADAMTSL4Q6UY14 1074 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 SLITRK4Q8IW52 837 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 USP7Q93009 1102 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 SCARF2Q96GP6 870 aaPredicted RBP13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 COX14Q96I36 57 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 TMEM74Q96NL1 305 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 AGAP3Q96P47 875 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 STRADBQ9C0K7 418 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 ABHD10Q9NUJ1 306 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 TMEM9Q9P0T7 183 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 SEPT10Q9P0V9 454 aa13.29□□□□□ -0.28
NUDCD3-201ENST00000338427 ATMQ13315 3056 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 PRAMEF33A0A0G2JMD5 474 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 C1orf232A0A0U1RR37 186 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 TEX51A0A1B0GUA7 166 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 SSU72P8A0A1W2PR75 194 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 CAPN8A6NHC0 703 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 ANKRD66B4E2M5 251 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 NUDT21O43809 227 aaKnown RBP13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 PRAMEF10O60809 474 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 ITGA2BP08514 1039 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 JMJD7P0C870 316 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 PNLIPP16233 465 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 CES1P23141 567 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 TEAD1P28347 426 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 CCKBRP32239 447 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 SPINT3P49223 89 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 TMPRSS3P57727 454 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 ADCY2Q08462 1091 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 PPIDQ08752 370 aaKnown RBP13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 MFSD7Q6UXD7 560 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 LYSMD3Q7Z3D4 306 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 PIM3Q86V86 326 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 NLRP8Q86W28 1048 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 RFX6Q8HWS3 928 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 NDUFAF2Q8N183 169 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 SPATA22Q8NHS9 363 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 KIAA1524Q8TCG1 905 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 JPH3Q8WXH2 748 aaPredicted RBP13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 FATE1Q969F0 183 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 PMEPA1Q969W9 287 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 HDAC11Q96DB2 347 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 CCDC42Q96M95 316 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 OR2M4Q96R27 311 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 MLPHQ9BV36 600 aaPredicted RBP13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 TSPY26PQ9H489 355 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 GOLPH3Q9H4A6 298 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 FAM83DQ9H4H8 585 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 ZNHIT6Q9NWK9 470 aaKnown RBP13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 KCTD5Q9NXV2 234 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 FOXJ2Q9P0K8 574 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 SHOC2Q9UQ13 582 aa13.28□□□□□ -0.28
NUDCD3-201ENST00000338427 C9orf172C9J069 976 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 TMX2-CTNND1H3BSU7 103 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 CBFA2T2O43439 604 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 DNAJC6O75061 913 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 MT-CYBP00156 380 aaPredicted RBP13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 WT1P19544 449 aaPredicted RBP13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 MX2P20592 715 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 COMTP21964 271 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 NFKBIAP25963 317 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 MAN1A1P33908 653 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 PCSK7Q16549 785 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 TAF1BQ53T94 588 aaPredicted RBP13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 ALS2CLQ60I27 953 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 SLC9A4Q6AI14 798 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 CCDC81Q6ZN84 652 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 CHST15Q7LFX5 561 aaPredicted RBP13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 NRSN1Q8IZ57 195 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 ZNF843Q8N446 348 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 GPR26Q8NDV2 337 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 EXD1Q8NHP7 514 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 TTC9Q92623 222 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 MAK16Q9BXY0 300 aaKnown RBP13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 UBP1Q9NZI7 540 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 KCNK6Q9Y257 313 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 SCN8AQ9UQD0 1980 aa13.27□□□□□ -0.29
NUDCD3-201ENST00000338427 IGHV5-10-1A0A0J9YXX1 117 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 F5H423 210 aaPredicted RBP13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 K7ENP7 123 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 APOL1O14791 398 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 AURKAO14965 403 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 MFAP3LO75121 409 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 CPNE6O95741 557 aa13.26□□□□□ -0.29
NUDCD3-201ENST00000338427 KRT1P04264 644 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms