RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 L2HGDHQ9H9P8 463 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 SAMD15Q9P1V8 674 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 WHRNQ9P202 907 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 FNDC3AQ9Y2H6 1198 aaKnown RBP11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 TCAF1Q9Y4C2 921 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 OR1A2Q9Y585 309 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 SNX11Q9Y5W9 270 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 SLC30A1Q9Y6M5 507 aa11.85□□□□□ -0.51
SPTLC1-202ENST00000337841 MUC6Q6W4X9 2439 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 SPTY2D1-AS1A0A0U1RR47 76 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 K7ESM1 405 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 AVILO75366 819 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 TMEM63AO94886 807 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 SLC25A14O95258 325 aaPredicted RBP11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 MYCLP1P12525 358 aaPredicted RBP11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 ENGP17813 658 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 CTSKP43235 329 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 ARRB1P49407 418 aaPredicted RBP11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 ZNF140P52738 457 aaPredicted RBP11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 ARL4CP56559 192 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 KIAA1024LP59773 190 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 TUBB4BP68371 445 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 SLC7A5Q01650 507 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 GRIK2Q13002 908 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 ITGA9Q13797 1035 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 PTPRCAPQ14761 206 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 NFATC4Q14934 902 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 SF3A2Q15428 464 aaKnown RBP11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 CHRNA6Q15825 494 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 HLA-BQ31612 363 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 ENPP7Q6UWV6 458 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 LAYNQ6UX15 382 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 ZNF534Q76KX8 674 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 HEATR4Q86WZ0 1026 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 OR13C4Q8NGS5 318 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 BTN2A2Q8WVV5 523 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 FUBP1Q96AE4 644 aaKnown RBP11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 CDKN2AIPNLQ96HQ2 116 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 WDR92Q96MX6 357 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 AGAP2Q99490 1192 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 KIFC1Q9BW19 673 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 ASB8Q9H765 288 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 MRM3Q9HC36 420 aaKnown RBP11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 CHRAC1Q9NRG0 131 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 FKBPLQ9UIM3 349 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 MAD1L1Q9Y6D9 718 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 THADAQ6YHU6 1953 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 PLXND1Q9Y4D7 1925 aa11.84□□□□□ -0.51
SPTLC1-202ENST00000337841 SDK1Q7Z5N4 2213 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 H7C0S8 307 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 TNFRSF10CO14798 259 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 INPP4BO15327 924 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 UGT1A9O60656 530 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 SRP72O76094 671 aaKnown RBP11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 ASMTLO95671 621 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 CER1O95813 267 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 TNFP01375 233 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 UGT1A6P19224 532 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 ITGALP20701 1170 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 UGT1A1P22309 533 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 UGT1A4P22310 534 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 PSMA3P25788 255 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 UGT1A3P35503 534 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 UGT1A5P35504 534 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 BLKP51451 505 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 CDK3Q00526 305 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 BNC1Q01954 994 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 GUCY2DQ02846 1103 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 PPARDQ03181 441 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 PDAP1Q13442 181 aaKnown RBP11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 GPR33Q49SQ1 333 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 AASDHQ4L235 1098 aaPredicted RBP11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 TCEAL6Q6IPX3 200 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 FAM151BQ6UXP7 276 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 MACC1Q6ZN28 852 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 PRR23CQ6ZRP0 262 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 SPATS2Q86XZ4 545 aaKnown RBP11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 CCNJLQ8IV13 435 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 PELI3Q8N2H9 469 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 NOA1Q8NC60 698 aaKnown RBP11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 OR56A4Q8NGH8 313 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 OR6P1Q8NGX9 317 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 GDAP1Q8TB36 358 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 TCEAL3Q969E4 200 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 GLYATL1Q969I3 302 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 HDAC10Q969S8 669 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 ULK4Q96C45 1275 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 DNAJC1Q96KC8 554 aaKnown RBP11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 TBATAQ96M53 351 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 ELF4Q99607 663 aaPredicted RBP11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 TTC1Q99614 292 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 NAT9Q9BTE0 207 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 GAREM1Q9H706 876 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 UGT1A7Q9HAW7 530 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 UGT1A10Q9HAW8 530 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 UGT1A8Q9HAW9 530 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 TRIM39Q9HCM9 518 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 PARD6AQ9NPB6 346 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 FAM114A2Q9NRY5 505 aa11.83□□□□□ -0.52
SPTLC1-202ENST00000337841 SYBUQ9NX95 663 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms