RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 MARCH4Q9P2E8 410 aaPredicted RBP13.87□□□□□ -0.19
SF1-202ENST00000334944 FGF10O15520 208 aaPredicted RBP13.87□□□□□ -0.19
SF1-202ENST00000334944 PRSS56P0CW18 603 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 CPB1P15086 417 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 TPTEP56180 551 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 ARPC4P59998 168 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 TAF10Q12962 218 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 FBXO48Q5FWF7 155 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 RSPO2Q6UXX9 243 aaPredicted RBP13.87□□□□□ -0.19
SF1-202ENST00000334944 DSG4Q86SJ6 1040 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 OFCC1Q8IZS5 231 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 CATSPER1Q8NEC5 780 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 FBXO32Q969P5 355 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 GPR78Q96P69 363 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 UPF3AQ9H1J1 476 aaKnown RBP13.87□□□□□ -0.19
SF1-202ENST00000334944 POMKQ9H5K3 350 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 CCSER2Q9H7U1 834 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 POLE4Q9NR33 117 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 ADA2Q9NZK5 511 aa13.87□□□□□ -0.19
SF1-202ENST00000334944 UXTQ9UBK9 157 aaPredicted RBP13.87□□□□□ -0.19
SF1-202ENST00000334944 PRSS51A0A1B0GVH4 220 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 SLC12A8A0AV02 714 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 FAM47E-STBD1D6RA91 191 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 CACNG3O60359 315 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 PEX11BO96011 259 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 INHBBP09529 407 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 JAK1P23458 1154 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 TRIM71Q2Q1W2 868 aaKnown RBP13.86□□□□□ -0.19
SF1-202ENST00000334944 ZBED5Q49AG3 693 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 MARC1Q5VT66 337 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 CARM1Q86X55 608 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 CLIP4Q8N3C7 705 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 PGBD5Q8N414 524 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 PCDH20Q8N6Y1 951 aaKnown RBP13.86□□□□□ -0.19
SF1-202ENST00000334944 STYXQ8WUJ0 223 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 ANKRD49Q8WVL7 239 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 SREK1Q8WXA9 508 aaKnown RBP13.86□□□□□ -0.19
SF1-202ENST00000334944 HDAC10Q969S8 669 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 EXOC2Q96KP1 924 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 CEP295NLQ96MC4 621 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 SERPINB11Q96P15 392 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 NPAS2Q99743 824 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 PADI4Q9UM07 663 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 PCDHB8Q9UN66 801 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 DGKBQ9Y6T7 804 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 ANKRD12Q6UB98 2062 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 A0A0U1RQS6 177 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 CA12O43570 354 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 KCNQ1P51787 676 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 NEK2P51955 445 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 ACLYP53396 1101 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 CDK18Q07002 472 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 GALNT3Q14435 633 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 RAB39AQ14964 217 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 CCSAPQ6IQ19 270 aaPredicted RBP13.86□□□□□ -0.19
SF1-202ENST00000334944 MON1AQ86VX9 555 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 BLOC1S5Q8TDH9 187 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 CYP2S1Q96SQ9 504 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 OSBPL11Q9BXB4 747 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 SOX17Q9H6I2 414 aaPredicted RBP13.86□□□□□ -0.19
SF1-202ENST00000334944 EPS8L2Q9H6S3 715 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 ENTPD7Q9NQZ7 604 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 PNPLA3Q9NST1 481 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 TREX1Q9NSU2 369 aa13.86□□□□□ -0.19
SF1-202ENST00000334944 HDAC3O15379 428 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 TPST1O60507 370 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 BAIAP3O94812 1187 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 PIK3R1P27986 724 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 NR4A2P43354 598 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 RALGDSQ12967 914 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 FAM209AQ5JX71 171 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 TMEM173Q86WV6 379 aaPredicted RBP13.85□□□□□ -0.19
SF1-202ENST00000334944 COLGALT2Q8IYK4 626 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 KYQ8NBH2 561 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 HGH1Q9BTY7 390 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 GMPR2Q9P2T1 348 aaKnown RBP13.85□□□□□ -0.19
SF1-202ENST00000334944 SORCS3Q9UPU3 1222 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 ERGIC3Q9Y282 383 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 RAP2CQ9Y3L5 183 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 MYO16Q9Y6X6 1858 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 NLRC5Q86WI3 1866 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 ATP6AP2A0A1C7CYW4 349 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 TOR1BO14657 336 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 MUSKO15146 869 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 PFDN6O15212 129 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 ATP6AP2O75787 350 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 MAP4P27816 1152 aaKnown RBP13.85□□□□□ -0.19
SF1-202ENST00000334944 CYP2C18P33260 490 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 KDELC1Q6UW63 502 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 SLC24A5Q71RS6 500 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 OR13J1Q8NGT2 312 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 MARCH2Q9P0N8 246 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 ARL5AQ9Y689 179 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 TET1Q8NFU7 2136 aa13.85□□□□□ -0.19
SF1-202ENST00000334944 A0A0D9SEW6 157 aa13.84□□□□□ -0.19
SF1-202ENST00000334944 ANKRD34BA5PLL1 514 aa13.84□□□□□ -0.19
SF1-202ENST00000334944 FAM149AA5PLN7 773 aa13.84□□□□□ -0.19
SF1-202ENST00000334944 TARM1B6A8C7 271 aa13.84□□□□□ -0.19
SF1-202ENST00000334944 TIPRLO75663 272 aa13.84□□□□□ -0.19
SF1-202ENST00000334944 CABYRO75952 493 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms