RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ADCK1Q86TW2 530 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 HID1Q8IV36 788 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 SMG8Q8ND04 991 aaKnown RBP14.96□□□□□ -0.01
C9orf47-201ENST00000334490 ITFG1Q8TB96 612 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 IL12RB2Q99665 862 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 UGT2B28Q9BY64 529 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 SUV39H2Q9H5I1 410 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 IL23AQ9NPF7 189 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 DNAJC11Q9NVH1 559 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 TMEM216Q9P0N5 145 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 SDK1Q7Z5N4 2213 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 GPR32O75388 356 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 COL6A2P12110 1019 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 RPIAP49247 311 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 TOMM20Q15388 145 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 MMAAQ8IVH4 418 aaKnown RBP14.96□□□□□ -0.01
C9orf47-201ENST00000334490 AIF1LQ9BQI0 150 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 SAR1AQ9NR31 198 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 PSMD13Q9UNM6 376 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 TRAF6Q9Y4K3 522 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 SNUPNO95149 360 aaKnown RBP14.96□□□□□ -0.01
C9orf47-201ENST00000334490 LRATO95237 230 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 SOX4Q06945 474 aaPredicted RBP14.96□□□□□ -0.01
C9orf47-201ENST00000334490 USP4Q13107 963 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 SQLEQ14534 574 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 INTS11Q5TA45 600 aaKnown RBP14.96□□□□□ -0.01
C9orf47-201ENST00000334490 TSTD1Q8NFU3 115 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 CYB5D2Q8WUJ1 264 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 LEF1Q9UJU2 399 aaPredicted RBP14.96□□□□□ -0.01
C9orf47-201ENST00000334490 M0R3G1 203 aa14.96□□□□□ -0.02
C9orf47-201ENST00000334490 TCF4P15884 667 aa14.96□□□□□ -0.02
C9orf47-201ENST00000334490 PPM1JQ5JR12 505 aa14.96□□□□□ -0.02
C9orf47-201ENST00000334490 TMEM26Q6ZUK4 368 aa14.96□□□□□ -0.02
C9orf47-201ENST00000334490 FCRL5Q96RD9 977 aa14.96□□□□□ -0.02
C9orf47-201ENST00000334490 TCF12Q99081 682 aa14.96□□□□□ -0.02
C9orf47-201ENST00000334490 MAP10Q9P2G4 905 aa14.96□□□□□ -0.02
C9orf47-201ENST00000334490 MRPS33Q9Y291 106 aaKnown RBP14.96□□□□□ -0.02
C9orf47-201ENST00000334490 COLEC10Q9Y6Z7 277 aa14.96□□□□□ -0.02
C9orf47-201ENST00000334490 FPGTO14772 594 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 METTL18O95568 372 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 PSMC3P17980 439 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 PPIDQ08752 370 aaKnown RBP14.95□□□□□ -0.02
C9orf47-201ENST00000334490 BHLHB9Q6PI77 547 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 CUZD1Q86UP6 607 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 STK32CQ86UX6 486 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 ZSCAN18Q8TBC5 510 aaPredicted RBP14.95□□□□□ -0.02
C9orf47-201ENST00000334490 DNAJB14Q8TBM8 379 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 SLC22A17Q8WUG5 538 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 NACC2Q96BF6 587 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 SIPA1Q96FS4 1042 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 SMAD5Q99717 465 aaKnown RBP14.95□□□□□ -0.02
C9orf47-201ENST00000334490 ZNF232Q9UNY5 417 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 SORCS3Q9UPU3 1222 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 AP3M1Q9Y2T2 418 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 GRIN2DO15399 1336 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 SLC7A4O43246 635 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 TM7SF2O76062 418 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 IPO13O94829 963 aaKnown RBP14.95□□□□□ -0.02
C9orf47-201ENST00000334490 PRKCGP05129 697 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 BPGMP07738 259 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 ACADSP16219 412 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 ACVRL1P37023 503 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 POLD2P49005 469 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 LIMK2P53671 638 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 COPZ1P61923 177 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 ARSIQ5FYB1 569 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 EID3Q8N140 333 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 PTPN18Q99952 460 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 SGK2Q9HBY8 427 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 INTS7Q9NVH2 962 aaKnown RBP14.95□□□□□ -0.02
C9orf47-201ENST00000334490 PITPNM1O00562 1244 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 ZMPSTE24O75844 475 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 UMPSP11172 480 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 TAF1AQ15573 450 aaPredicted RBP14.95□□□□□ -0.02
C9orf47-201ENST00000334490 CAPRIN2Q6IMN6 1127 aaKnown RBP14.95□□□□□ -0.02
C9orf47-201ENST00000334490 TMEM154Q6P9G4 183 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 IQCKQ8N0W5 287 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 TCAIMQ8N3R3 496 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 PHC3Q8NDX5 983 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 GLMNQ92990 594 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 ZNF599Q96NL3 588 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 USE1Q9NZ43 259 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 IGKV6D-21A0A0A0MT36 114 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 IGKV6-21A0A0C4DH24 114 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 CCNDBP1O95273 360 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 GCNT7Q6ZNI0 430 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 SMG9Q9H0W8 520 aaKnown RBP14.95□□□□□ -0.02
C9orf47-201ENST00000334490 RERGLQ9H628 205 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 ELAC1Q9H777 363 aaKnown RBP14.95□□□□□ -0.02
C9orf47-201ENST00000334490 PNPLA8Q9NP80 782 aa14.95□□□□□ -0.02
C9orf47-201ENST00000334490 H3BN98 237 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 AKT2P31751 481 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 PTGER3P43115 390 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 IRF5Q13568 498 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 NCBP2-AS2Q69YL0 99 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 Q6ZVU0 165 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 DENND6AQ8IWF6 608 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 ROGDIQ9GZN7 287 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 PNPOQ9NVS9 261 aa14.94□□□□□ -0.02
C9orf47-201ENST00000334490 GGA2Q9UJY4 613 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms